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synbreed log file (build_win64)
Thu Mar 11 22:35:15 2021: Building binary for package synbreed (SVN revision 738)
using R version 4.0.4 Patched (2021-03-05 r80083) ...
* installing to library 'R:/lib/local/4.0'
* installing *source* package 'synbreed' ...
** using staged installation
** R
** data
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'synbreed'
finding HTML links ... done
Extract.GenMap html
Extract.relationshipMatrix html
LD html
LDDist html
LDMap html
MME html
add.gpData html
add.individuals html
add.markers html
add.pedigree html
cattle html
codeGeno html
create.gpData html
create.pedigree html
crossVal html
discard.individuals html
discard.markers html
gpData2cross html
gpData2data.frame html
gpMod html
kinship html
maize html
manhattanPlot html
mice html
plot.LDdf html
plot.LDmat html
plot.genMap html
plot.pedigree html
plot.relationshipMatrix html
plotNeighbourLD html
predict.gpMod html
read.vcf2list html
read.vcf2matrix html
simul.pedigree html
simul.phenotype html
summary.LDdf html
summary.cvData html
summary.gpData html
summary.gpMod html
summary.map html
summary.pedigree html
summary.relationshipMatrix html
write.beagle html
write.plink html
write.relationshipMatrix html
write.vcf html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: S3 method 'summary.gpMod' was declared in NAMESPACE but not found
** testing if installed package can be loaded from final location
Warning: S3 method 'summary.gpMod' was declared in NAMESPACE but not found
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'synbreed' as synbreed_0.12-14.zip
* DONE (synbreed)
Run time: 14 seconds.