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plgraphics log file (check_x86_64_linux)

Mon Mar 18 22:15:53 2019: Checking package plgraphics (SVN revision 130) ...
* using log directory ‘/srv/rf/building/build_2019-03-18-22-10/RF_PKG_CHECK/PKGS/plgraphics.Rcheck’
* using R version 3.5.3 Patched (2019-03-11 r76221)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--as-cran’
* checking for file ‘plgraphics/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘plgraphics’ version ‘0.5’
* checking CRAN incoming feasibility ...Warning: /srv/rf/building/build_2019-03-18-22-10/RF_PKG_CHECK/PKGS/plgraphics.Rcheck/00_pkg_src/plgraphics/man/d.river.Rd:42: unexpected section header '\examples'
Warning: /srv/rf/building/build_2019-03-18-22-10/RF_PKG_CHECK/PKGS/plgraphics.Rcheck/00_pkg_src/plgraphics/man/d.river.Rd:55: unexpected section header '\keyword'
Warning: /srv/rf/building/build_2019-03-18-22-10/RF_PKG_CHECK/PKGS/plgraphics.Rcheck/00_pkg_src/plgraphics/man/d.river.Rd:56: unexpected END_OF_INPUT '
'
Warning: /srv/rf/building/build_2019-03-18-22-10/RF_PKG_CHECK/PKGS/plgraphics.Rcheck/00_pkg_src/plgraphics/man/d.river.Rd:42: unexpected section header '\examples'
Warning: /srv/rf/building/build_2019-03-18-22-10/RF_PKG_CHECK/PKGS/plgraphics.Rcheck/00_pkg_src/plgraphics/man/d.river.Rd:55: unexpected section header '\keyword'
Warning: /srv/rf/building/build_2019-03-18-22-10/RF_PKG_CHECK/PKGS/plgraphics.Rcheck/00_pkg_src/plgraphics/man/d.river.Rd:56: unexpected END_OF_INPUT '
'
 NOTE
Maintainer: ‘Werner Stahel ’

New submission
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialization versions ... OK
* checking whether package ‘plgraphics’ can be installed ... [10s/10s] WARNING
Found the following significant warnings:
  Warning: /srv/rf/building/build_2019-03-18-22-10/RF_PKG_CHECK/PKGS/plgraphics.Rcheck/00_pkg_src/plgraphics/man/d.river.Rd:42: unexpected section header '\examples'
  Warning: /srv/rf/building/build_2019-03-18-22-10/RF_PKG_CHECK/PKGS/plgraphics.Rcheck/00_pkg_src/plgraphics/man/d.river.Rd:55: unexpected section header '\keyword'
  Warning: /srv/rf/building/build_2019-03-18-22-10/RF_PKG_CHECK/PKGS/plgraphics.Rcheck/00_pkg_src/plgraphics/man/d.river.Rd:56: unexpected END_OF_INPUT '
See ‘/srv/rf/building/build_2019-03-18-22-10/RF_PKG_CHECK/PKGS/plgraphics.Rcheck/00install.out’ for details.
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [22s/22s] NOTE
Found the following assignments to the global environment:
File ‘plgraphics/R/pl.R’:
  assign(".plargs", rr, pos = 1)
  assign(".plargs", rr, pos = 1)
  assign(".ploptions", lnewo, pos = 1)
* checking Rd files ... WARNING
prepare_Rd: d.river.Rd:42: unexpected section header '\examples'
prepare_Rd: d.river.Rd:55: unexpected section header '\keyword'
prepare_Rd: d.river.Rd:56: unexpected END_OF_INPUT '
'
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... WARNING
Undocumented code objects:
  ‘Surv’
All user-level objects in a package should have documentation entries.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... NOTE
S3 methods shown with full name in documentation object 'nobs.survreg':
  ‘nobs.survreg’ ‘nobs.coxph’

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking sizes of PDF files under ‘inst/doc’ ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [19s/19s] NOTE
Examples with CPU or elapsed time > 5s
        user system elapsed
plregr 8.625  0.015   8.712
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘pl-test.R’ [14s/14s]
 [14s/15s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking re-building of vignette outputs ... [12s/12s] OK
* checking PDF version of manual ... OK
* DONE

Status: 3 WARNINGs, 4 NOTEs
See
  ‘/srv/rf/building/build_2019-03-18-22-10/RF_PKG_CHECK/PKGS/plgraphics.Rcheck/00check.log’
for details.


Run time: 134.3 seconds.

Additional Logs:   00install.out
Thanks to:
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