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matrixStats log file (check_x86_64_linux)

Thu Aug 18 14:56:03 2016: Checking package matrixStats (SVN revision 260) ...
* using log directory ‘/mnt/building/build_2016-08-18-12-24/RF_PKG_CHECK/PKGS/matrixStats.Rcheck’
* using R version 3.3.1 Patched (2016-08-17 r71112)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--as-cran’
* checking for file ‘matrixStats/DESCRIPTION’ ... OK
* this is package ‘matrixStats’ version ‘0.10.1’
* checking CRAN incoming feasibility ... WARNING
Maintainer: ‘Henrik Bengtsson ’

Insufficient package version (submitted: 0.10.1, existing: 0.50.2)

Found the following (possibly) invalid URLs:
  URL: https://inst.eecs.berkeley.edu/~ee127a/book/login/def_lse_fcn.html
    From: man/logSumExp.Rd
    Status: Error
    Message: libcurl error code 60
    	server certificate verification failed. CAfile: /etc/ssl/certs/ca-certificates.crt CRLfile: none
    	(Status without verification: OK)

No package encoding and non-ASCII characters in the following R files:
  R/weightedMedian.R
    101: #   Henrik Bengtsson and Ola \enc{Hssjer}{Hossjer}, Centre for Mathematical

The Title field should be in title case, current version then in title case:
‘Methods that apply to rows and columns of a matrix’
‘Methods that Apply to Rows and Columns of a Matrix’

The Description field should not start with the package name,
  'This package' or similar.

The Date field is over a month old.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘matrixStats’ can be installed ... [5s/6s] OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... NOTE
'library' or 'require' call to ‘R.rsp’ in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
madDiff.numeric: no visible global function definition for ‘mad’
rowQuantiles: no visible global function definition for ‘quantile’
Undefined global functions or variables:
  mad quantile
Consider adding
  importFrom("stats", "mad", "quantile")
to your NAMESPACE file.
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compiled code ... OK
* checking examples ... [1s/1s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘anyMissing.R’
  Running ‘binCounts.R’ [13s/13s]
  Running ‘binMeans,binCounts.R’
  Running ‘logSumExp.R’
  Running ‘product.R’
  Running ‘psortKM.R’
  Running ‘rowCounts.R’
  Running ‘rowLogSumExps.R’
  Running ‘rowMads.R’
  Running ‘rowMedians.R’
  Running ‘rowOrderStats.R’
  Running ‘rowProds.R’
  Running ‘rowQuantiles.R’
  Running ‘rowRanges.R’
  Running ‘rowRanks,ties.R’
  Running ‘rowRanks.R’
  Running ‘rowSds.R’
  Running ‘rowTabulates.R’
  Running ‘rowVars.R’
  Running ‘rowWeightedMeans.R’
  Running ‘rowWeightedMedians.R’
  Running ‘sdDiff.R’
  Running ‘signTabulate.R’
 [33s/34s] OK
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING, 2 NOTEs
See
  ‘/mnt/building/build_2016-08-18-12-24/RF_PKG_CHECK/PKGS/matrixStats.Rcheck/00check.log’
for details.


Run time: 73.02 seconds.

Additional Logs:   00install.out
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