R Development Page
loret log file (check_x86_64_windows)
* using log directory 'R:/run/building/build_2017-10-09-00-05/RF_PKG_CHECK/PKGS/loret.Rcheck'
* using R version 3.4.1 Patched (2017-09-04 r73206)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--as-cran'
* checking for file 'loret/DESCRIPTION' ... OK
* this is package 'loret' version '0.0-1'
* checking CRAN incoming feasibility ... NOTE
Maintainer: 'Thomas Rusch '
New submission
The Date field is over a month old.
* checking package namespace information ... OK
* checking package dependencies ... NOTE
Depends: includes the non-default packages:
'partykit' 'nnet' 'MASS' 'modeltools' 'sandwich' 'ordinal'
Adding so many packages to the search path is excessive and importing
selectively is preferable.
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'loret' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... WARNING
'::' or ':::' import not declared from: 'Formula'
Unexported object imported by a ':::' call: 'nnet:::coef.multinom'
See the note in ?`:::` about the use of this operator.
Including base/recommended package(s):
'nnet'
* checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
coef.multinom plot.clmtree plot.loret predict.clm.fit predict.clmtree
predict.loret print.clmtree print.loret
See section 'Registering S3 methods' in the 'Writing R Extensions'
manual.
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
clmfit: no visible global function definition for 'make.link'
coefficients.multinom: no visible global function definition for 'coef'
loret: no visible binding for global variable 'gaussian'
loret: no visible binding for global variable 'glmfit'
multinomfit: no visible global function definition for 'formula'
multinomfit: no visible global function definition for 'model.matrix'
multinomfit: no visible global function definition for 'model.weights'
multinomfit: no visible global function definition for 'model.frame'
multinomfit: no visible global function definition for 'residuals'
plot.clmtree: no visible global function definition for
'plot.constparty'
plot.loret: no visible global function definition for 'plot.constparty'
predict.clm.fit: no visible global function definition for
'model.frame'
predict.clm.fit: no visible global function definition for
'.checkMFClasses'
predict.clm.fit: no visible global function definition for
'model.matrix'
predict.clm.fit: no visible global function definition for
'model.response'
predict.clm.fit: no visible global function definition for
'response.name'
predict.clm.fit: no visible global function definition for 'clm.newRho'
predict.clm.fit: no visible global function definition for 'setLinks'
predict.clm.fit: no visible global function definition for
'get_clmRho.clm'
predict.clm.fit: no visible global function definition for 'coef'
predict.clm.fit: no visible global function definition for
'prob.predict.clm'
predict.clm.fit: no visible global function definition for
'cum.prob.predict.clm'
predict.clm.fit: no visible global function definition for
'lin.pred.predict.clm'
predict.clm.fit : : no visible global function definition
for 'napredict'
Undefined global functions or variables:
.checkMFClasses clm.newRho coef cum.prob.predict.clm formula gaussian
get_clmRho.clm glmfit lin.pred.predict.clm make.link model.frame
model.matrix model.response model.weights napredict plot.constparty
prob.predict.clm residuals response.name setLinks
Consider adding
importFrom("stats", ".checkMFClasses", "coef", "formula", "gaussian",
"make.link", "model.frame", "model.matrix",
"model.response", "model.weights", "napredict", "residuals")
to your NAMESPACE file.
* checking for missing documentation entries ... WARNING
Undocumented code objects:
'clmfit' 'clmtree' 'coef.multinom' 'coefficients.multinom' 'loret'
'multinomfit' 'multinomtree' 'plot.clmtree' 'plot.loret'
'predict.clm.fit' 'predict.clmtree' 'predict.loret' 'print.clmtree'
'print.loret'
All user-level objects in a package should have documentation entries.
See chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
* checking examples ... NONE
* checking PDF version of manual ... OK
* checking for code which exercises the package ... WARNING
No examples, no tests, no vignettes
* DONE
Status: 3 WARNINGs, 4 NOTEs
See
'R:/run/building/build_2017-10-09-00-05/RF_PKG_CHECK/PKGS/loret.Rcheck/00check.log'
for details.
Run time: 62.67 seconds.