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whitebox log file (check_x86_64_windows)

* using log directory 'R:/run/building/build_2020-09-07-15-46/RF_PKG_CHECK/PKGS/whitebox.Rcheck'
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--as-cran'
* checking for file 'whitebox/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'whitebox' version '1.4.0'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... NOTE
Maintainer: 'Qiusheng Wu '

New submission

Package was archived on CRAN

Found the following (possibly) invalid URLs:
  URL: https://LidarBlog.com
    From: README.md
    Status: Error
    Message: libcurl error code 51:
      	SSL: no alternative certificate subject name matches target host name 'LidarBlog.com'
      	(Status without verification: OK)
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking serialization versions ... OK
* checking whether package 'whitebox' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... NOTE
unable to verify current time
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... WARNING
Functions or methods with usage in documentation object 'absolute_value' but not in code:
  'absolute_value'

Functions or methods with usage in documentation object 'adaptive_filter' but not in code:
  'adaptive_filter'

Functions or methods with usage in documentation object 'add' but not in code:
  'add'

Functions or methods with usage in documentation object 'add_point_coordinates_to_table' but not in code:
  'add_point_coordinates_to_table'

Functions or methods with usage in documentation object 'aggregate_raster' but not in code:
  'aggregate_raster'

Functions or methods with usage in documentation object 'and' but not in code:
  'and'

Functions or methods with usage in documentation object 'anova' but not in code:
  'anova'

Functions or methods with usage in documentation object 'arc_cos' but not in code:
  'arc_cos'

Functions or methods with usage in documentation object 'arc_sin' but not in code:
  'arc_sin'

Functions or methods with usage in documentation object 'arc_tan' but not in code:
  'arc_tan'

Functions or methods with usage in documentation object 'aspect' but not in code:
  'aspect'

Functions or methods with usage in documentation object 'atan2' but not in code:
  'atan2'

Functions or methods with usage in documentation object 'attribute_correlation' but not in code:
  'attribute_correlation'

Functions or methods with usage in documentation object 'attribute_histogram' but not in code:
  'attribute_histogram'

Functions or methods with usage in documentation object 'attribute_scattergram' but not in code:
  'attribute_scattergram'

Functions or methods with usage in documentation object 'average_flowpath_slope' but not in code:
  'average_flowpath_slope'

Functions or methods with usage in documentation object 'average_normal_vector_angular_deviation' but not in code:
  'average_normal_vector_angular_deviation'

Functions or methods with usage in documentation object 'average_overlay' but not in code:
  'average_overlay'

Functions or methods with usage in documentation object 'average_upslope_flowpath_length' but not in code:
  'average_upslope_flowpath_length'

Functions or methods with usage in documentation object 'balance_contrast_enhancement' but not in code:
  'balance_contrast_enhancement'

Functions or methods with usage in documentation object 'basins' but not in code:
  'basins'

Functions or methods with usage in documentation object 'bilateral_filter' but not in code:
  'bilateral_filter'

Functions or methods with usage in documentation object 'block_maximum_gridding' but not in code:
  'block_maximum_gridding'

Functions or methods with usage in documentation object 'block_minimum_gridding' but not in code:
  'block_minimum_gridding'

Functions or methods with usage in documentation object 'boundary_shape_complexity' but not in code:
  'boundary_shape_complexity'

Functions or methods with usage in documentation object 'breach_depressions' but not in code:
  'breach_depressions'

Functions or methods with usage in documentation object 'breach_single_cell_pits' but not in code:
  'breach_single_cell_pits'

Functions or methods with usage in documentation object 'buffer_raster' but not in code:
  'buffer_raster'

Functions or methods with usage in documentation object 'ceil' but not in code:
  'ceil'

Functions or methods with usage in documentation object 'centroid' but not in code:
  'centroid'

Functions or methods with usage in documentation object 'centroid_vector' but not in code:
  'centroid_vector'

Functions or methods with usage in documentation object 'change_vector_analysis' but not in code:
  'change_vector_analysis'

Functions or methods with usage in documentation object 'circular_variance_of_aspect' but not in code:
  'circular_variance_of_aspect'

Functions or methods with usage in documentation object 'classify_overlap_points' but not in code:
  'classify_overlap_points'

Functions or methods with usage in documentation object 'clean_vector' but not in code:
  'clean_vector'

Functions or methods with usage in documentation object 'clip' but not in code:
  'clip'

Functions or methods with usage in documentation object 'clip_lidar_to_polygon' but not in code:
  'clip_lidar_to_polygon'

Functions or methods with usage in documentation object 'clip_raster_to_polygon' but not in code:
  'clip_raster_to_polygon'

Functions or methods with usage in documentation object 'closing' but not in code:
  'closing'

Functions or methods with usage in documentation object 'clump' but not in code:
  'clump'

Functions or methods with usage in documentation object 'compactness_ratio' but not in code:
  'compactness_ratio'

Functions or methods with usage in documentation object 'conservative_smoothing_filter' but not in code:
  'conservative_smoothing_filter'

Functions or methods with usage in documentation object 'construct_vector_tin' but not in code:
  'construct_vector_tin'

Functions or methods with usage in documentation object 'convert_nodata_to_zero' but not in code:
  'convert_nodata_to_zero'

Functions or methods with usage in documentation object 'convert_raster_format' but not in code:
  'convert_raster_format'

Functions or methods with usage in documentation object 'corner_detection' but not in code:
  'corner_detection'

Functions or methods with usage in documentation object 'correct_vignetting' but not in code:
  'correct_vignetting'

Functions or methods with usage in documentation object 'cos' but not in code:
  'cos'

Functions or methods with usage in documentation object 'cosh' but not in code:
  'cosh'

Functions or methods with usage in documentation object 'cost_allocation' but not in code:
  'cost_allocation'

Functions or methods with usage in documentation object 'cost_distance' but not in code:
  'cost_distance'

Functions or methods with usage in documentation object 'cost_pathway' but not in code:
  'cost_pathway'

Functions or methods with usage in documentation object 'count_if' but not in code:
  'count_if'

Functions or methods with usage in documentation object 'create_colour_composite' but not in code:
  'create_colour_composite'

Functions or methods with usage in documentation object 'create_hexagonal_vector_grid' but not in code:
  'create_hexagonal_vector_grid'

Functions or methods with usage in documentation object 'create_plane' but not in code:
  'create_plane'

Functions or methods with usage in documentation object 'create_rectangular_vector_grid' but not in code:
  'create_rectangular_vector_grid'

Functions or methods with usage in documentation object 'crispness_index' but not in code:
  'crispness_index'

Functions or methods with usage in documentation object 'cross_tabulation' but not in code:
  'cross_tabulation'

Functions or methods with usage in documentation object 'csv_points_to_vector' but not in code:
  'csv_points_to_vector'

Functions or methods with usage in documentation object 'cumulative_distribution' but not in code:
  'cumulative_distribution'

Functions or methods with usage in documentation object 'd8_flow_accumulation' but not in code:
  'd8_flow_accumulation'

Functions or methods with usage in documentation object 'd8_mass_flux' but not in code:
  'd8_mass_flux'

Functions or methods with usage in documentation object 'd8_pointer' but not in code:
  'd8_pointer'

Functions or methods with usage in documentation object 'd_inf_flow_accumulation' but not in code:
  'd_inf_flow_accumulation'

Functions or methods with usage in documentation object 'd_inf_mass_flux' but not in code:
  'd_inf_mass_flux'

Functions or methods with usage in documentation object 'd_inf_pointer' but not in code:
  'd_inf_pointer'

Functions or methods with usage in documentation object 'decrement' but not in code:
  'decrement'

Functions or methods with usage in documentation object 'depth_in_sink' but not in code:
  'depth_in_sink'

Functions or methods with usage in documentation object 'dev_from_mean_elev' but not in code:
  'dev_from_mean_elev'

Functions or methods with usage in documentation object 'diff_from_mean_elev' but not in code:
  'diff_from_mean_elev'

Functions or methods with usage in documentation object 'diff_of_gaussian_filter' but not in code:
  'diff_of_gaussian_filter'

Functions or methods with usage in documentation object 'difference' but not in code:
  'difference'

Functions or methods with usage in documentation object 'direct_decorrelation_stretch' but not in code:
  'direct_decorrelation_stretch'

Functions or methods with usage in documentation object 'directional_relief' but not in code:
  'directional_relief'

Functions or methods with usage in documentation object 'dissolve' but not in code:
  'dissolve'

Functions or methods with usage in documentation object 'distance_to_outlet' but not in code:
  'distance_to_outlet'

Functions or methods with usage in documentation object 'diversity_filter' but not in code:
  'diversity_filter'

Functions or methods with usage in documentation object 'divide' but not in code:
  'divide'

Functions or methods with usage in documentation object 'downslope_distance_to_stream' but not in code:
  'downslope_distance_to_stream'

Functions or methods with usage in documentation object 'downslope_flowpath_length' but not in code:
  'downslope_flowpath_length'

Functions or methods with usage in documentation object 'downslope_index' but not in code:
  'downslope_index'

Functions or methods with usage in documentation object 'drainage_preserving_smoothing' but not in code:
  'drainage_preserving_smoothing'

Functions or methods with usage in documentation object 'edge_density' but not in code:
  'edge_density'

Functions or methods with usage in documentation object 'edge_preserving_mean_filter' but not in code:
  'edge_preserving_mean_filter'

Functions or methods with usage in documentation object 'edge_proportion' but not in code:
  'edge_proportion'

Functions or methods with usage in documentation object 'elev_above_pit' but not in code:
  'elev_above_pit'

Functions or methods with usage in documentation object 'elev_percentile' but not in code:
  'elev_percentile'

Functions or methods with usage in documentation object 'elev_relative_to_min_max' but not in code:
  'elev_relative_to_min_max'

Functions or methods with usage in documentation object 'elev_relative_to_watershed_min_max' but not in code:
  'elev_relative_to_watershed_min_max'

Functions or methods with usage in documentation object 'elevation_above_stream' but not in code:
  'elevation_above_stream'

Functions or methods with usage in documentation object 'elevation_above_stream_euclidean' but not in code:
  'elevation_above_stream_euclidean'

Functions or methods with usage in documentation object 'eliminate_coincident_points' but not in code:
  'eliminate_coincident_points'

Functions or methods with usage in documentation object 'elongation_ratio' but not in code:
  'elongation_ratio'

Functions or methods with usage in documentation object 'emboss_filter' but not in code:
  'emboss_filter'

Functions or methods with usage in documentation object 'equal_to' but not in code:
  'equal_to'

Functions or methods with usage in documentation object 'erase' but not in code:
  'erase'

Functions or methods with usage in documentation object 'erase_polygon_from_lidar' but not in code:
  'erase_polygon_from_lidar'

Functions or methods with usage in documentation object 'erase_polygon_from_raster' but not in code:
  'erase_polygon_from_raster'

Functions or methods with usage in documentation object 'euclidean_allocation' but not in code:
  'euclidean_allocation'

Functions or methods with usage in documentation object 'euclidean_distance' but not in code:
  'euclidean_distance'

Functions or methods with usage in documentation object 'exp' but not in code:
  'exp'

Functions or methods with usage in documentation object 'exp2' but not in code:
  'exp2'

Functions or methods with usage in documentation object 'export_table_to_csv' but not in code:
  'export_table_to_csv'

Functions or methods with usage in documentation object 'extend_vector_lines' but not in code:
  'extend_vector_lines'

Functions or methods with usage in documentation object 'extract_nodes' but not in code:
  'extract_nodes'

Functions or methods with usage in documentation object 'extract_raster_statistics' but not in code:
  'extract_raster_statistics'

Functions or methods with usage in documentation object 'extract_raster_values_at_points' but not in code:
  'extract_raster_values_at_points'

Functions or methods with usage in documentation object 'extract_streams' but not in code:
  'extract_streams'

Functions or methods with usage in documentation object 'extract_valleys' but not in code:
  'extract_valleys'

Functions or methods with usage in documentation object 'farthest_channel_head' but not in code:
  'farthest_channel_head'

Functions or methods with usage in documentation object 'fast_almost_gaussian_filter' but not in code:
  'fast_almost_gaussian_filter'

Functions or methods with usage in documentation object 'fd8_flow_accumulation' but not in code:
  'fd8_flow_accumulation'

Functions or methods with usage in documentation object 'fd8_pointer' but not in code:
  'fd8_pointer'

Functions or methods with usage in documentation object 'feature_preserving_denoise' but not in code:
  'feature_preserving_denoise'

Functions or methods with usage in documentation object 'feature_preserving_smoothing' but not in code:
  'feature_preserving_smoothing'

Functions or methods with usage in documentation object 'fetch_analysis' but not in code:
  'fetch_analysis'

Functions or methods with usage in documentation object 'fill_burn' but not in code:
  'fill_burn'

Functions or methods with usage in documentation object 'fill_depressions' but not in code:
  'fill_depressions'

Functions or methods with usage in documentation object 'fill_missing_data' but not in code:
  'fill_missing_data'

Functions or methods with usage in documentation object 'fill_single_cell_pits' but not in code:
  'fill_single_cell_pits'

Functions or methods with usage in documentation object 'filter_lidar_classes' but not in code:
  'filter_lidar_classes'

Functions or methods with usage in documentation object 'filter_lidar_scan_angles' but not in code:
  'filter_lidar_scan_angles'

Functions or methods with usage in documentation object 'find_flightline_edge_points' but not in code:
  'find_flightline_edge_points'

Functions or methods with usage in documentation object 'find_lowest_or_highest_points' but not in code:
  'find_lowest_or_highest_points'

Functions or methods with usage in documentation object 'find_main_stem' but not in code:
  'find_main_stem'

Functions or methods with usage in documentation object 'find_no_flow_cells' but not in code:
  'find_no_flow_cells'

Functions or methods with usage in documentation object 'find_parallel_flow' but not in code:
  'find_parallel_flow'

Functions or methods with usage in documentation object 'find_patch_or_class_edge_cells' but not in code:
  'find_patch_or_class_edge_cells'

Functions or methods with usage in documentation object 'find_ridges' but not in code:
  'find_ridges'

Functions or methods with usage in documentation object 'flatten_lakes' but not in code:
  'flatten_lakes'

Functions or methods with usage in documentation object 'flightline_overlap' but not in code:
  'flightline_overlap'

Functions or methods with usage in documentation object 'flip_image' but not in code:
  'flip_image'

Functions or methods with usage in documentation object 'flood_order' but not in code:
  'flood_order'

Functions or methods with usage in documentation object 'floor' but not in code:
  'floor'

Functions or methods with usage in documentation object 'flow_accumulation_full_workflow' but not in code:
  'flow_accumulation_full_workflow'

Functions or methods with usage in documentation object 'flow_length_diff' but not in code:
  'flow_length_diff'

Functions or methods with usage in documentation object 'gamma_correction' but not in code:
  'gamma_correction'

Functions or methods with usage in documentation object 'gaussian_contrast_stretch' but not in code:
  'gaussian_contrast_stretch'

Functions or methods with usage in documentation object 'gaussian_filter' but not in code:
  'gaussian_filter'

Functions or methods with usage in documentation object 'greater_than' but not in code:
  'greater_than'

Functions or methods with usage in documentation object 'hack_stream_order' but not in code:
  'hack_stream_order'

Functions or methods with usage in documentation object 'high_pass_filter' but not in code:
  'high_pass_filter'

Functions or methods with usage in documentation object 'high_pass_median_filter' but not in code:
  'high_pass_median_filter'

Functions or methods with usage in documentation object 'highest_position' but not in code:
  'highest_position'

Functions or methods with usage in documentation object 'hillshade' but not in code:
  'hillshade'

Functions or methods with usage in documentation object 'hillslopes' but not in code:
  'hillslopes'

Functions or methods with usage in documentation object 'histogram_equalization' but not in code:
  'histogram_equalization'

Functions or methods with usage in documentation object 'histogram_matching' but not in code:
  'histogram_matching'

Functions or methods with usage in documentation object 'histogram_matching_two_images' but not in code:
  'histogram_matching_two_images'

Functions or methods with usage in documentation object 'hole_proportion' but not in code:
  'hole_proportion'

Functions or methods with usage in documentation object 'horizon_angle' but not in code:
  'horizon_angle'

Functions or methods with usage in documentation object 'horton_stream_order' but not in code:
  'horton_stream_order'

Functions or methods with usage in documentation object 'hypsometric_analysis' but not in code:
  'hypsometric_analysis'

Functions or methods with usage in documentation object 'idw_interpolation' but not in code:
  'idw_interpolation'

Functions or methods with usage in documentation object 'ihs_to_rgb' but not in code:
  'ihs_to_rgb'

Functions or methods with usage in documentation object 'image_autocorrelation' but not in code:
  'image_autocorrelation'

Functions or methods with usage in documentation object 'image_correlation' but not in code:
  'image_correlation'

Functions or methods with usage in documentation object 'image_regression' but not in code:
  'image_regression'

Functions or methods with usage in documentation object 'image_stack_profile' but not in code:
  'image_stack_profile'

Functions or methods with usage in documentation object 'impoundment_index' but not in code:
  'impoundment_index'

Functions or methods with usage in documentation object 'impoundment_size_index' but not in code:
  'impoundment_size_index'

Functions or methods with usage in documentation object 'in_place_add' but not in code:
  'in_place_add'

Functions or methods with usage in documentation object 'in_place_divide' but not in code:
  'in_place_divide'

Functions or methods with usage in documentation object 'in_place_multiply' but not in code:
  'in_place_multiply'

Functions or methods with usage in documentation object 'in_place_subtract' but not in code:
  'in_place_subtract'

Functions or methods with usage in documentation object 'increment' but not in code:
  'increment'

Functions or methods with usage in documentation object 'integer_division' but not in code:
  'integer_division'

Functions or methods with usage in documentation object 'integral_image' but not in code:
  'integral_image'

Functions or methods with usage in documentation object 'intersect' but not in code:
  'intersect'

Functions or methods with usage in documentation object 'is_no_data' but not in code:
  'is_no_data'

Functions or methods with usage in documentation object 'isobasins' but not in code:
  'isobasins'

Functions or methods with usage in documentation object 'jenson_snap_pour_points' but not in code:
  'jenson_snap_pour_points'

Functions or methods with usage in documentation object 'join_tables' but not in code:
  'join_tables'

Functions or methods with usage in documentation object 'k_means_clustering' but not in code:
  'k_means_clustering'

Functions or methods with usage in documentation object 'k_nearest_mean_filter' but not in code:
  'k_nearest_mean_filter'

Functions or methods with usage in documentation object 'kappa_index' but not in code:
  'kappa_index'

Functions or methods with usage in documentation object 'ks_test_for_normality' but not in code:
  'ks_test_for_normality'

Functions or methods with usage in documentation object 'laplacian_filter' but not in code:
  'laplacian_filter'

Functions or methods with usage in documentation object 'laplacian_of_gaussian_filter' but not in code:
  'laplacian_of_gaussian_filter'

Functions or methods with usage in documentation object 'las_to_ascii' but not in code:
  'las_to_ascii'

Functions or methods with usage in documentation object 'las_to_multipoint_shapefile' but not in code:
  'las_to_multipoint_shapefile'

Functions or methods with usage in documentation object 'las_to_shapefile' but not in code:
  'las_to_shapefile'

Functions or methods with usage in documentation object 'layer_footprint' but not in code:
  'layer_footprint'

Functions or methods with usage in documentation object 'lee_filter' but not in code:
  'lee_filter'

Functions or methods with usage in documentation object 'length_of_upstream_channels' but not in code:
  'length_of_upstream_channels'

Functions or methods with usage in documentation object 'less_than' but not in code:
  'less_than'

Functions or methods with usage in documentation object 'lidar_block_maximum' but not in code:
  'lidar_block_maximum'

Functions or methods with usage in documentation object 'lidar_block_minimum' but not in code:
  'lidar_block_minimum'

Functions or methods with usage in documentation object 'lidar_classify_subset' but not in code:
  'lidar_classify_subset'

Functions or methods with usage in documentation object 'lidar_colourize' but not in code:
  'lidar_colourize'

Functions or methods with usage in documentation object 'lidar_construct_vector_tin' but not in code:
  'lidar_construct_vector_tin'

Functions or methods with usage in documentation object 'lidar_elevation_slice' but not in code:
  'lidar_elevation_slice'

Functions or methods with usage in documentation object 'lidar_ground_point_filter' but not in code:
  'lidar_ground_point_filter'

Functions or methods with usage in documentation object 'lidar_hex_binning' but not in code:
  'lidar_hex_binning'

Functions or methods with usage in documentation object 'lidar_hillshade' but not in code:
  'lidar_hillshade'

Functions or methods with usage in documentation object 'lidar_histogram' but not in code:
  'lidar_histogram'

Functions or methods with usage in documentation object 'lidar_idw_interpolation' but not in code:
  'lidar_idw_interpolation'

Functions or methods with usage in documentation object 'lidar_info' but not in code:
  'lidar_info'

Functions or methods with usage in documentation object 'lidar_join' but not in code:
  'lidar_join'

Functions or methods with usage in documentation object 'lidar_kappa_index' but not in code:
  'lidar_kappa_index'

Functions or methods with usage in documentation object 'lidar_nearest_neighbour_gridding' but not in code:
  'lidar_nearest_neighbour_gridding'

Functions or methods with usage in documentation object 'lidar_point_density' but not in code:
  'lidar_point_density'

Functions or methods with usage in documentation object 'lidar_point_stats' but not in code:
  'lidar_point_stats'

Functions or methods with usage in documentation object 'lidar_ransac_planes' but not in code:
  'lidar_ransac_planes'

Functions or methods with usage in documentation object 'lidar_remove_duplicates' but not in code:
  'lidar_remove_duplicates'

Functions or methods with usage in documentation object 'lidar_remove_outliers' but not in code:
  'lidar_remove_outliers'

Functions or methods with usage in documentation object 'lidar_segmentation' but not in code:
  'lidar_segmentation'

Functions or methods with usage in documentation object 'lidar_segmentation_based_filter' but not in code:
  'lidar_segmentation_based_filter'

Functions or methods with usage in documentation object 'lidar_thin' but not in code:
  'lidar_thin'

Functions or methods with usage in documentation object 'lidar_thin_high_density' but not in code:
  'lidar_thin_high_density'

Functions or methods with usage in documentation object 'lidar_tile' but not in code:
  'lidar_tile'

Functions or methods with usage in documentation object 'lidar_tile_footprint' but not in code:
  'lidar_tile_footprint'

Functions or methods with usage in documentation object 'lidar_tin_gridding' but not in code:
  'lidar_tin_gridding'

Functions or methods with usage in documentation object 'lidar_tophat_transform' but not in code:
  'lidar_tophat_transform'

Functions or methods with usage in documentation object 'line_detection_filter' but not in code:
  'line_detection_filter'

Functions or methods with usage in documentation object 'line_intersections' but not in code:
  'line_intersections'

Functions or methods with usage in documentation object 'line_thinning' but not in code:
  'line_thinning'

Functions or methods with usage in documentation object 'linearity_index' but not in code:
  'linearity_index'

Functions or methods with usage in documentation object 'lines_to_polygons' but not in code:
  'lines_to_polygons'

Functions or methods with usage in documentation object 'list_unique_values' but not in code:
  'list_unique_values'

Functions or methods with usage in documentation object 'ln' but not in code:
  'ln'

Functions or methods with usage in documentation object 'log10' but not in code:
  'log10'

Functions or methods with usage in documentation object 'log2' but not in code:
  'log2'

Functions or methods with usage in documentation object 'long_profile' but not in code:
  'long_profile'

Functions or methods with usage in documentation object 'long_profile_from_points' but not in code:
  'long_profile_from_points'

Functions or methods with usage in documentation object 'longest_flowpath' but not in code:
  'longest_flowpath'

Functions or methods with usage in documentation object 'lowest_position' but not in code:
  'lowest_position'

Functions or methods with usage in documentation object 'majority_filter' but not in code:
  'majority_filter'

Functions or methods with usage in documentation object 'max' but not in code:
  'max'

Functions or methods with usage in documentation object 'max_absolute_overlay' but not in code:
  'max_absolute_overlay'

Functions or methods with usage in documentation object 'max_anisotropy_dev' but not in code:
  'max_anisotropy_dev'

Functions or methods with usage in documentation object 'max_anisotropy_dev_signature' but not in code:
  'max_anisotropy_dev_signature'

Functions or methods with usage in documentation object 'max_branch_length' but not in code:
  'max_branch_length'

Functions or methods with usage in documentation object 'max_difference_from_mean' but not in code:
  'max_difference_from_mean'

Functions or methods with usage in documentation object 'max_downslope_elev_change' but not in code:
  'max_downslope_elev_change'

Functions or methods with usage in documentation object 'max_elev_dev_signature' but not in code:
  'max_elev_dev_signature'

Functions or methods with usage in documentation object 'max_elevation_deviation' but not in code:
  'max_elevation_deviation'

Functions or methods with usage in documentation object 'max_overlay' but not in code:
  'max_overlay'

Functions or methods with usage in documentation object 'max_upslope_flowpath_length' but not in code:
  'max_upslope_flowpath_length'

Functions or methods with usage in documentation object 'maximum_filter' but not in code:
  'maximum_filter'

Functions or methods with usage in documentation object 'mean_filter' but not in code:
  'mean_filter'

Functions or methods with usage in documentation object 'median_filter' but not in code:
  'median_filter'

Functions or methods with usage in documentation object 'medoid' but not in code:
  'medoid'

Functions or methods with usage in documentation object 'merge_line_segments' but not in code:
  'merge_line_segments'

Functions or methods with usage in documentation object 'merge_table_with_csv' but not in code:
  'merge_table_with_csv'

Functions or methods with usage in documentation object 'merge_vectors' but not in code:
  'merge_vectors'

Functions or methods with usage in documentation object 'min' but not in code:
  'min'

Functions or methods with usage in documentation object 'min_absolute_overlay' but not in code:
  'min_absolute_overlay'

Functions or methods with usage in documentation object 'min_downslope_elev_change' but not in code:
  'min_downslope_elev_change'

Functions or methods with usage in documentation object 'min_max_contrast_stretch' but not in code:
  'min_max_contrast_stretch'

Functions or methods with usage in documentation object 'min_overlay' but not in code:
  'min_overlay'

Functions or methods with usage in documentation object 'minimum_bounding_box' but not in code:
  'minimum_bounding_box'

Functions or methods with usage in documentation object 'minimum_bounding_circle' but not in code:
  'minimum_bounding_circle'

Functions or methods with usage in documentation object 'minimum_bounding_envelope' but not in code:
  'minimum_bounding_envelope'

Functions or methods with usage in documentation object 'minimum_convex_hull' but not in code:
  'minimum_convex_hull'

Functions or methods with usage in documentation object 'minimum_filter' but not in code:
  'minimum_filter'

Functions or methods with usage in documentation object 'modified_k_means_clustering' but not in code:
  'modified_k_means_clustering'

Functions or methods with usage in documentation object 'modify_no_data_value' but not in code:
  'modify_no_data_value'

Functions or methods with usage in documentation object 'modulo' but not in code:
  'modulo'

Functions or methods with usage in documentation object 'mosaic' but not in code:
  'mosaic'

Functions or methods with usage in documentation object 'mosaic_with_feathering' but not in code:
  'mosaic_with_feathering'

Functions or methods with usage in documentation object 'multi_part_to_single_part' but not in code:
  'multi_part_to_single_part'

Functions or methods with usage in documentation object 'multiply' but not in code:
  'multiply'

Functions or methods with usage in documentation object 'multiscale_roughness' but not in code:
  'multiscale_roughness'

Functions or methods with usage in documentation object 'multiscale_roughness_signature' but not in code:
  'multiscale_roughness_signature'

Functions or methods with usage in documentation object 'multiscale_std_dev_normals' but not in code:
  'multiscale_std_dev_normals'

Functions or methods with usage in documentation object 'multiscale_std_dev_normals_signature' but not in code:
  'multiscale_std_dev_normals_signature'

Functions or methods with usage in documentation object 'multiscale_topographic_position_image' but not in code:
  'multiscale_topographic_position_image'

Functions or methods with usage in documentation object 'narrowness_index' but not in code:
  'narrowness_index'

Functions or methods with usage in documentation object 'nearest_neighbour_gridding' but not in code:
  'nearest_neighbour_gridding'

Functions or methods with usage in documentation object 'negate' but not in code:
  'negate'

Functions or methods with usage in documentation object 'new_raster_from_base' but not in code:
  'new_raster_from_base'

Functions or methods with usage in documentation object 'normal_vectors' but not in code:
  'normal_vectors'

Functions or methods with usage in documentation object 'normalized_difference_index' but not in code:
  'normalized_difference_index'

Functions or methods with usage in documentation object 'normalized_difference_vegetation_index' but not in code:
  'normalized_difference_vegetation_index'

Functions or methods with usage in documentation object 'not' but not in code:
  'not'

Functions or methods with usage in documentation object 'not_equal_to' but not in code:
  'not_equal_to'

Functions or methods with usage in documentation object 'num_downslope_neighbours' but not in code:
  'num_downslope_neighbours'

Functions or methods with usage in documentation object 'num_inflowing_neighbours' but not in code:
  'num_inflowing_neighbours'

Functions or methods with usage in documentation object 'num_upslope_neighbours' but not in code:
  'num_upslope_neighbours'

Functions or methods with usage in documentation object 'olympic_filter' but not in code:
  'olympic_filter'

Functions or methods with usage in documentation object 'opening' but not in code:
  'opening'

Functions or methods with usage in documentation object 'or' but not in code:
  'or'

Functions or methods with usage in documentation object 'panchromatic_sharpening' but not in code:
  'panchromatic_sharpening'

Functions or methods with usage in documentation object 'patch_orientation' but not in code:
  'patch_orientation'

Functions or methods with usage in documentation object 'pennock_landform_class' but not in code:
  'pennock_landform_class'

Functions or methods with usage in documentation object 'percent_elev_range' but not in code:
  'percent_elev_range'

Functions or methods with usage in documentation object 'percent_equal_to' but not in code:
  'percent_equal_to'

Functions or methods with usage in documentation object 'percent_greater_than' but not in code:
  'percent_greater_than'

Functions or methods with usage in documentation object 'percent_less_than' but not in code:
  'percent_less_than'

Functions or methods with usage in documentation object 'percentage_contrast_stretch' but not in code:
  'percentage_contrast_stretch'

Functions or methods with usage in documentation object 'percentile_filter' but not in code:
  'percentile_filter'

Functions or methods with usage in documentation object 'perimeter_area_ratio' but not in code:
  'perimeter_area_ratio'

Functions or methods with usage in documentation object 'pick_from_list' but not in code:
  'pick_from_list'

Functions or methods with usage in documentation object 'plan_curvature' but not in code:
  'plan_curvature'

Functions or methods with usage in documentation object 'polygon_area' but not in code:
  'polygon_area'

Functions or methods with usage in documentation object 'polygon_long_axis' but not in code:
  'polygon_long_axis'

Functions or methods with usage in documentation object 'polygon_perimeter' but not in code:
  'polygon_perimeter'

Functions or methods with usage in documentation object 'polygon_short_axis' but not in code:
  'polygon_short_axis'

Functions or methods with usage in documentation object 'polygonize' but not in code:
  'polygonize'

Functions or methods with usage in documentation object 'polygons_to_lines' but not in code:
  'polygons_to_lines'

Functions or methods with usage in documentation object 'power' but not in code:
  'power'

Functions or methods with usage in documentation object 'prewitt_filter' but not in code:
  'prewitt_filter'

Functions or methods with usage in documentation object 'principal_component_analysis' but not in code:
  'principal_component_analysis'

Functions or methods with usage in documentation object 'print_geo_tiff_tags' but not in code:
  'print_geo_tiff_tags'

Functions or methods with usage in documentation object 'profile' but not in code:
  'profile'

Functions or methods with usage in documentation object 'profile_curvature' but not in code:
  'profile_curvature'

Functions or methods with usage in documentation object 'quantiles' but not in code:
  'quantiles'

Functions or methods with usage in documentation object 'radius_of_gyration' but not in code:
  'radius_of_gyration'

Functions or methods with usage in documentation object 'raise_walls' but not in code:
  'raise_walls'

Functions or methods with usage in documentation object 'random_field' but not in code:
  'random_field'

Functions or methods with usage in documentation object 'random_sample' but not in code:
  'random_sample'

Functions or methods with usage in documentation object 'range_filter' but not in code:
  'range_filter'

Functions or methods with usage in documentation object 'raster_area' but not in code:
  'raster_area'

Functions or methods with usage in documentation object 'raster_cell_assignment' but not in code:
  'raster_cell_assignment'

Functions or methods with usage in documentation object 'raster_histogram' but not in code:
  'raster_histogram'

Functions or methods with usage in documentation object 'raster_streams_to_vector' but not in code:
  'raster_streams_to_vector'

Functions or methods with usage in documentation object 'raster_summary_stats' but not in code:
  'raster_summary_stats'

Functions or methods with usage in documentation object 'raster_to_vector_lines' but not in code:
  'raster_to_vector_lines'

Functions or methods with usage in documentation object 'raster_to_vector_points' but not in code:
  'raster_to_vector_points'

Functions or methods with usage in documentation object 'rasterize_streams' but not in code:
  'rasterize_streams'

Functions or methods with usage in documentation object 'reciprocal' but not in code:
  'reciprocal'

Functions or methods with usage in documentation object 'reclass' but not in code:
  'reclass'

Functions or methods with usage in documentation object 'reclass_equal_interval' but not in code:
  'reclass_equal_interval'

Functions or methods with usage in documentation object 'reclass_from_file' but not in code:
  'reclass_from_file'

Functions or methods with usage in documentation object 'reinitialize_attribute_table' but not in code:
  'reinitialize_attribute_table'

Functions or methods with usage in documentation object 'related_circumscribing_circle' but not in code:
  'related_circumscribing_circle'

Functions or methods with usage in documentation object 'relative_aspect' but not in code:
  'relative_aspect'

Functions or methods with usage in documentation object 'relative_stream_power_index' but not in code:
  'relative_stream_power_index'

Functions or methods with usage in documentation object 'relative_topographic_position' but not in code:
  'relative_topographic_position'

Functions or methods with usage in documentation object 'remove_off_terrain_objects' but not in code:
  'remove_off_terrain_objects'

Functions or methods with usage in documentation object 'remove_polygon_holes' but not in code:
  'remove_polygon_holes'

Functions or methods with usage in documentation object 'remove_short_streams' but not in code:
  'remove_short_streams'

Functions or methods with usage in documentation object 'remove_spurs' but not in code:
  'remove_spurs'

Functions or methods with usage in documentation object 'resample' but not in code:
  'resample'

Functions or methods with usage in documentation object 'rescale_value_range' but not in code:
  'rescale_value_range'

Functions or methods with usage in documentation object 'rgb_to_ihs' but not in code:
  'rgb_to_ihs'

Functions or methods with usage in documentation object 'rho8_pointer' but not in code:
  'rho8_pointer'

Functions or methods with usage in documentation object 'roberts_cross_filter' but not in code:
  'roberts_cross_filter'

Functions or methods with usage in documentation object 'root_mean_square_error' but not in code:
  'root_mean_square_error'

Functions or methods with usage in documentation object 'round' but not in code:
  'round'

Functions or methods with usage in documentation object 'ruggedness_index' but not in code:
  'ruggedness_index'

Functions or methods with usage in documentation object 'scharr_filter' but not in code:
  'scharr_filter'

Functions or methods with usage in documentation object 'sediment_transport_index' but not in code:
  'sediment_transport_index'

Functions or methods with usage in documentation object 'select_tiles_by_polygon' but not in code:
  'select_tiles_by_polygon'

Functions or methods with usage in documentation object 'set_nodata_value' but not in code:
  'set_nodata_value'

Functions or methods with usage in documentation object 'shape_complexity_index' but not in code:
  'shape_complexity_index'

Functions or methods with usage in documentation object 'shape_complexity_index_raster' but not in code:
  'shape_complexity_index_raster'

Functions or methods with usage in documentation object 'shreve_stream_magnitude' but not in code:
  'shreve_stream_magnitude'

Functions or methods with usage in documentation object 'sigmoidal_contrast_stretch' but not in code:
  'sigmoidal_contrast_stretch'

Functions or methods with usage in documentation object 'sin' but not in code:
  'sin'

Functions or methods with usage in documentation object 'single_part_to_multi_part' but not in code:
  'single_part_to_multi_part'

Functions or methods with usage in documentation object 'sinh' but not in code:
  'sinh'

Functions or methods with usage in documentation object 'sink' but not in code:
  'sink'

Functions or methods with usage in documentation object 'slope' but not in code:
  'slope'

Functions or methods with usage in documentation object 'slope_vs_elevation_plot' but not in code:
  'slope_vs_elevation_plot'

Functions or methods with usage in documentation object 'smooth_vectors' but not in code:
  'smooth_vectors'

Functions or methods with usage in documentation object 'snap_pour_points' but not in code:
  'snap_pour_points'

Functions or methods with usage in documentation object 'sobel_filter' but not in code:
  'sobel_filter'

Functions or methods with usage in documentation object 'spherical_std_dev_of_normals' but not in code:
  'spherical_std_dev_of_normals'

Functions or methods with usage in documentation object 'split_colour_composite' but not in code:
  'split_colour_composite'

Functions or methods with usage in documentation object 'split_with_lines' but not in code:
  'split_with_lines'

Functions or methods with usage in documentation object 'square' but not in code:
  'square'

Functions or methods with usage in documentation object 'square_root' but not in code:
  'square_root'

Functions or methods with usage in documentation object 'standard_deviation_contrast_stretch' but not in code:
  'standard_deviation_contrast_stretch'

Functions or methods with usage in documentation object 'standard_deviation_filter' but not in code:
  'standard_deviation_filter'

Functions or methods with usage in documentation object 'standard_deviation_of_slope' but not in code:
  'standard_deviation_of_slope'

Functions or methods with usage in documentation object 'stochastic_depression_analysis' but not in code:
  'stochastic_depression_analysis'

Functions or methods with usage in documentation object 'strahler_order_basins' but not in code:
  'strahler_order_basins'

Functions or methods with usage in documentation object 'strahler_stream_order' but not in code:
  'strahler_stream_order'

Functions or methods with usage in documentation object 'stream_link_class' but not in code:
  'stream_link_class'

Functions or methods with usage in documentation object 'stream_link_identifier' but not in code:
  'stream_link_identifier'

Functions or methods with usage in documentation object 'stream_link_length' but not in code:
  'stream_link_length'

Functions or methods with usage in documentation object 'stream_link_slope' but not in code:
  'stream_link_slope'

Functions or methods with usage in documentation object 'stream_slope_continuous' but not in code:
  'stream_slope_continuous'

Functions or methods with usage in documentation object 'subbasins' but not in code:
  'subbasins'

Functions or methods with usage in documentation object 'subtract' but not in code:
  'subtract'

Functions or methods with usage in documentation object 'sum_overlay' but not in code:
  'sum_overlay'

Functions or methods with usage in documentation object 'surface_area_ratio' but not in code:
  'surface_area_ratio'

Functions or methods with usage in documentation object 'symmetrical_difference' but not in code:
  'symmetrical_difference'

Functions or methods with usage in documentation object 'tan' but not in code:
  'tan'

Functions or methods with usage in documentation object 'tangential_curvature' but not in code:
  'tangential_curvature'

Functions or methods with usage in documentation object 'tanh' but not in code:
  'tanh'

Functions or methods with usage in documentation object 'thicken_raster_line' but not in code:
  'thicken_raster_line'

Functions or methods with usage in documentation object 'tin_gridding' but not in code:
  'tin_gridding'

Functions or methods with usage in documentation object 'to_degrees' but not in code:
  'to_degrees'

Functions or methods with usage in documentation object 'to_radians' but not in code:
  'to_radians'

Functions or methods with usage in documentation object 'tophat_transform' but not in code:
  'tophat_transform'

Functions or methods with usage in documentation object 'topological_stream_order' but not in code:
  'topological_stream_order'

Functions or methods with usage in documentation object 'total_curvature' but not in code:
  'total_curvature'

Functions or methods with usage in documentation object 'total_filter' but not in code:
  'total_filter'

Functions or methods with usage in documentation object 'trace_downslope_flowpaths' but not in code:
  'trace_downslope_flowpaths'

Functions or methods with usage in documentation object 'trend_surface' but not in code:
  'trend_surface'

Functions or methods with usage in documentation object 'trend_surface_vector_points' but not in code:
  'trend_surface_vector_points'

Functions or methods with usage in documentation object 'tributary_identifier' but not in code:
  'tributary_identifier'

Functions or methods with usage in documentation object 'truncate' but not in code:
  'truncate'

Functions or methods with usage in documentation object 'turning_bands_simulation' but not in code:
  'turning_bands_simulation'

Functions or methods with usage in documentation object 'union' but not in code:
  'union'

Functions or methods with usage in documentation object 'unnest_basins' but not in code:
  'unnest_basins'

Functions or methods with usage in documentation object 'unsharp_masking' but not in code:
  'unsharp_masking'

Functions or methods with usage in documentation object 'user_defined_weights_filter' but not in code:
  'user_defined_weights_filter'

Functions or methods with usage in documentation object 'vector_hex_binning' but not in code:
  'vector_hex_binning'

Functions or methods with usage in documentation object 'vector_lines_to_raster' but not in code:
  'vector_lines_to_raster'

Functions or methods with usage in documentation object 'vector_points_to_raster' but not in code:
  'vector_points_to_raster'

Functions or methods with usage in documentation object 'vector_polygons_to_raster' but not in code:
  'vector_polygons_to_raster'

Functions or methods with usage in documentation object 'viewshed' but not in code:
  'viewshed'

Functions or methods with usage in documentation object 'visibility_index' but not in code:
  'visibility_index'

Functions or methods with usage in documentation object 'voronoi_diagram' but not in code:
  'voronoi_diagram'

Functions or methods with usage in documentation object 'watershed' but not in code:
  'watershed'

Functions or methods with usage in documentation object 'wbt_fill_depressions_wang_and_lui' but not in code:
  'wbt_fill_depressions_wang_and_lui'

Functions or methods with usage in documentation object 'wbt_lee_filter' but not in code:
  'wbt_lee_filter'

Functions or methods with usage in documentation object 'wbt_lidar_construct_vector_tin' but not in code:
  'wbt_lidar_construct_vector_tin'

Functions or methods with usage in documentation object 'wbt_lidar_rfb_interpolation' but not in code:
  'wbt_lidar_rfb_interpolation'

Functions or methods with usage in documentation object 'wbt_relative_stream_power_index' but not in code:
  'wbt_relative_stream_power_index'

Functions or methods with usage in documentation object 'weighted_overlay' but not in code:
  'weighted_overlay'

Functions or methods with usage in documentation object 'weighted_sum' but not in code:
  'weighted_sum'

Functions or methods with usage in documentation object 'wetness_index' but not in code:
  'wetness_index'

Functions or methods with usage in documentation object 'write_function_memory_insertion' but not in code:
  'write_function_memory_insertion'

Functions or methods with usage in documentation object 'xor' but not in code:
  'xor'

Functions or methods with usage in documentation object 'z_scores' but not in code:
  'z_scores'

Functions or methods with usage in documentation object 'zonal_statistics' but not in code:
  'zonal_statistics'

* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
  Running 'testthat.R'
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 1 WARNING, 2 NOTEs
See
  'R:/run/building/build_2020-09-07-15-46/RF_PKG_CHECK/PKGS/whitebox.Rcheck/00check.log'
for details.


Run time: 164.41 seconds.

Additional Logs:   00install.out
Thanks to:
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