R Development Page

gdata log file (check_x86_64_windows)

* using log directory 'R:/run/building/build_2017-06-06-19-24/RF_PKG_CHECK/PKGS/gdata.Rcheck'
* using R version 3.3.3 (2017-03-06)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--as-cran'
* checking for file 'gdata/DESCRIPTION' ... OK
* this is package 'gdata' version '2.18.0'
* checking CRAN incoming feasibility ... WARNING
Maintainer: 'Gregory R. Warnes '

Insufficient package version (submitted: 2.18.0, existing: 2.18.0)

Days since last update: 0
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'gdata' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in Makefiles ... OK
* checking for GNU extensions in Makefiles ... OK
* checking sizes of PDF files under 'inst/doc' ...Warning: running command '"R:\base\qpdf\QPDF-2~1.1\bin\qpdf.exe" --stream-data=compress --object-streams=generate R:\tmp\RtmpKSkdfZ\pdf60c4e483ef2/gregmisc.pdf R:\tmp\RtmpKSkdfZ\pdf60c7fa64e64' had status 2
 OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... OK
Examples with CPU or elapsed time > 5s
         user system elapsed
read.xls 0.02      0    6.04
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
  Running 'runRUnitTests.R'
  Running 'test.humanReadable.R'
  Comparing 'test.humanReadable.Rout' to 'test.humanReadable.Rout.save' ...6,11c6
< gdata: Unable to load perl libaries needed by read.xls()
< gdata: to support 'XLSX' (Excel 2007+) files.
< 
< gdata: Run the function 'installXLSXsupport()'
< gdata: to automatically download and install the perl
< gdata: libaries needed to support Excel XLS and XLSX formats.
---
> gdata: read.xls support for 'XLSX' (Excel 2007+) files ENABLED.
  Running 'test.read.xls.R' [10s]
  Comparing 'test.read.xls.Rout' to 'test.read.xls.Rout.save' ...6,11c6
< gdata: Unable to load perl libaries needed by read.xls()
< gdata: to support 'XLSX' (Excel 2007+) files.
< 
< gdata: Run the function 'installXLSXsupport()'
< gdata: to automatically download and install the perl
< gdata: libaries needed to support Excel XLS and XLSX formats.
---
> gdata: read.xls support for 'XLSX' (Excel 2007+) files ENABLED.
32,35d26
< Error in installXLSXsupport() : 
< Unable to install Perl XLSX support libraries.
< 
< 
41,42d31
< WARNING: Perl module Spreadsheet::ParseXLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
197,198d185
< WARNING: Perl module Spreadsheet::ParseXLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
353,354d339
< WARNING: Perl module Spreadsheet::ParseXLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
530,533c515
< ************************************************************
< ** DIFF IN THIS SECTION IS EXPECTED BECAUSE PERL PACKAGES **
< ** FOR SUPPORTING XLSX ARE NOT INSTALLED                  **
< ************************************************************
---
> [1] 4
549,552c531,532
< ************************************************************
< ** DIFF IN THIS SECTION IS EXPECTED BECAUSE PERL PACKAGES **
< ** FOR SUPPORTING XLSX ARE NOT INSTALLED                  **
< ************************************************************
---
> [1] "Sheet First"                  "Sheet Second"                
> [3] "Sheet with a very long name!" "Sheet with initial text"     
556,557d535
< WARNING: Perl module Spreadsheet::ParseXLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
569,570d546
< WARNING: Perl module Spreadsheet::ParseXLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
579,580d554
< WARNING: Perl module Spreadsheet::ParseXLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
606,607d579
< WARNING: Perl module Spreadsheet::ParseXLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
652,655c624,684
< ************************************************************
< ** DIFF IN THIS SECTION IS EXPECTED BECAUSE PERL PACKAGES **
< ** FOR SUPPORTING XLSX ARE NOT INSTALLED                  **
< ************************************************************
---
>   A  B   C
> 1 1  1   1
> 2 2  4   8
> 3 3  9  27
> 4 4 16  64
> 5 5 25 125
> 6 6 36 216
> 7 7 49 343
>           X D E.  F  G Factor
> 1  FirstRow 1 NA NA NA    Red
> 2 SecondRow 2  1 NA NA  Green
> 3  ThirdRow 3  2  1 NA    Red
> 4 FourthRow 4  3  2  1  Black
>    V1         V2          V3        V4          V5 V6                     V7
> 1   1 2001-01-01 01:01:00.00 0.2058182          NA  A 2001-01-01 01:01:01.01
> 2   2 2002-02-02 02:02:00.00 0.2910708          NA  B 2002-02-02 02:02:02.02
> 3   3 2003-03-03 03:03:00.00 0.3564875 -0.84147098  C 2003-03-03 03:03:03.03
> 4   4 2004-04-04 04:04:00.00 0.4116363  0.70807342    2004-04-04 04:04:04.04
> 5   5 2005-05-05 05:05:00.00 0.4602234  0.50136797  A 2005-05-05 05:05:05.05
> 6   6 2006-06-06 06:06:00.00        NA  0.25136984  B 2006-06-06 06:06:06.06
> 7   7 2007-07-07 07:07:00.00 0.5445436  0.06318679  B 2007-07-07 07:07:07.07
> 8   8 2008-08-08 08:08:00.00 0.5821416          NA  C 2008-08-08 08:08:08.08
> 9   9 2009-09-09 09:09:00.00 0.6174545  0.00000000  A 2009-09-09 09:09:09.09
> 10 10 2010-10-10 10:10:00.00 0.6508541  0.00000000  A 2010-10-10 10:10:10.10
>          V8
> 1  36892.04
> 2  37289.08
> 3  37683.13
> 4  38081.17
> 5  38477.21
> 6  38874.25
> 7  39270.30
> 8  39668.34
> 9  40065.38
> 10 40461.42
>                                                                         V1
> 1 This line contains text that would need to be skipped to get to the data
> 2                                                                         
> 3                                                                         
> 4                                                                         
> 5                                                                         
> 6                                                                         
> 7                                                                         
>               V2 V3   V4   V5   V6     V7
> 1                                        
> 2 This line too!                         
> 3                 D   E     F    G Factor
> 4       FirstRow  1       Red
> 5      SecondRow  2    1    Green
> 6       ThirdRow  3    2    1     Red
> 7      FourthRow  4    3    2    1  Black
>           X D E.  F  G Factor
> 1  FirstRow 1 NA NA NA    Red
> 2 SecondRow 2  1 NA NA  Green
> 3  ThirdRow 3  2  1 NA    Red
> 4 FourthRow 4  3  2  1  Black
>    X       X.1 D E.  F  G Factor
> 1 NA  FirstRow 1 NA NA NA    Red
> 2 NA SecondRow 2  1 NA NA  Green
> 3 NA  ThirdRow 3  2  1 NA    Red
> 4 NA FourthRow 4  3  2  1  Black
660,661d688
< WARNING: Perl module Spreadsheet::ParseXLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
680,683c707,712
< ************************************************************
< ** DIFF IN THIS SECTION IS EXPECTED BECAUSE PERL PACKAGES **
< ** FOR SUPPORTING XLSX ARE NOT INSTALLED                  **
< ************************************************************
---
>           X  D E.  F  G Factor
> 1  FirstRow  1 NA NA NA    Red
> 2 SecondRow  2  1 NA NA  Green
> 3           NA NA NA NA       
> 4  ThirdRow  3  2  1 NA    Red
> 5 FourthRow  4  3  2  1  Black
704,705d732
< WARNING: Perl module Spreadsheet::ParseXLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
727,730d753
< ************************************************************
< ** DIFF IN THIS SECTION IS EXPECTED BECAUSE PERL PACKAGES **
< ** FOR SUPPORTING XLSX ARE NOT INSTALLED                  **
< ************************************************************
739,740d761
< WARNING: Perl module Spreadsheet::ParseXLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
753,756d773
< ************************************************************
< ** DIFF IN THIS SECTION IS EXPECTED BECAUSE PERL PACKAGES **
< ** FOR SUPPORTING XLSX ARE NOT INSTALLED                  **
< ************************************************************
767,768d783
< WARNING: Perl module Spreadsheet::ParseXLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
794,795d808
< WARNING: Perl module Spreadsheet::ParseXLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
821,822d833
< WARNING: Perl module Spreadsheet::ParseXLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
848,849d858
< WARNING: Perl module Spreadsheet::ParseXLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
  Running 'test.reorder.factor.R'
  Comparing 'test.reorder.factor.Rout' to 'test.reorder.factor.Rout.save' ...17,22c17
< gdata: Unable to load perl libaries needed by read.xls()
< gdata: to support 'XLSX' (Excel 2007+) files.
< 
< gdata: Run the function 'installXLSXsupport()'
< gdata: to automatically download and install the perl
< gdata: libaries needed to support Excel XLS and XLSX formats.
---
> gdata: read.xls support for 'XLSX' (Excel 2007+) files ENABLED.
  Running 'test.write.fwf.eol.R'
  Running 'tests.write.fwf.R'
  Comparing 'tests.write.fwf.Rout' to 'tests.write.fwf.Rout.save' ...13,18c13
< gdata: Unable to load perl libaries needed by read.xls()
< gdata: to support 'XLSX' (Excel 2007+) files.
< 
< gdata: Run the function 'installXLSXsupport()'
< gdata: to automatically download and install the perl
< gdata: libaries needed to support Excel XLS and XLSX formats.
---
> gdata: read.xls support for 'XLSX' (Excel 2007+) files ENABLED.
Warning messages:
1: running command '"diff" -bw "R:\tmp\Rtmpaqq4W2\Rdiffaa2031d268df" "R:\tmp\Rtmpaqq4W2\Rdiffba20595b2324"' had status 1 
2: running command '"diff" -bw "R:\tmp\Rtmpaqq4W2\Rdiffaa201cce5c92" "R:\tmp\Rtmpaqq4W2\Rdiffba203e81ecd"' had status 1 
3: running command '"diff" -bw "R:\tmp\Rtmpaqq4W2\Rdiffaa20412e44f4" "R:\tmp\Rtmpaqq4W2\Rdiffba2023c774fe"' had status 1 
4: running command '"diff" -bw "R:\tmp\Rtmpaqq4W2\Rdiffaa2055ca6ddc" "R:\tmp\Rtmpaqq4W2\Rdiffba2049352a11"' had status 1 
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING
See
  'R:/run/building/build_2017-06-06-19-24/RF_PKG_CHECK/PKGS/gdata.Rcheck/00check.log'
for details.


Run time: 86.32 seconds.