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multcomp log file (check_x86_64_windows)

* using log directory 'R:/run/building/build_2025-01-29-15-44/RF_PKG_CHECK/PKGS/multcomp.Rcheck'
* using R version 4.4.2 Patched (2025-01-26 r87654 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.3.0
    GNU Fortran (GCC) 13.3.0
* running under: Windows 10 x64 (build 19045)
* using session charset: UTF-8
* using option '--as-cran'
* checking for file 'multcomp/DESCRIPTION' ... OK
* this is package 'multcomp' version '1.4-28'
* checking CRAN incoming feasibility ... Note_to_CRAN_maintainers
Maintainer: 'Torsten Hothorn '
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking serialization versions ... OK
* checking whether package 'multcomp' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... NOTE
unable to verify current time
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [12s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in shell scripts ... OK
* checking sizes of PDF files under 'inst/doc' ... NOTE
Unable to find GhostScript executable to run checks on size reduction
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [18s] OK
* checking differences from 'multcomp-Ex.Rout' to 'multcomp-Ex.Rout.save' ... OK

749a750,767
> 
> 	 Simultaneous Confidence Intervals
> 
> Multiple Comparisons of Means: Tukey Contrasts
> 
> 
> Fit: Colr(formula = breaks ~ wool + tension, data = warpbreaks)
> 
> Quantile = 2.3437
> 95% family-wise confidence level
>  
> 
> Linear Hypotheses:
>            Estimate lwr     upr    
> M - L == 0  1.1969  -0.2336  2.6275
> H - L == 0  2.1613   0.6761  3.6464
> H - M == 0  0.9643  -0.4297  2.3584
> 
755c773,774
< detaching 'package:basefun', 'package:variables'
---
> detaching 'package:tram', 'package:mlt', 'package:basefun',
>   'package:variables'
1566,1569d1584
< Warning in Matrix.DeprecatedCoerce(cd1, cd2) :
<   'as(, "dpoMatrix")' is deprecated.
< Use 'as(as(as(., "dMatrix"), "posdefMatrix"), "unpackedMatrix")' instead.
< See help("Deprecated") and help("Matrix-deprecated").
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
  Running 'bugfix.R'
  Comparing 'bugfix.Rout' to 'bugfix.Rout.save' ... OK
  Running 'regtest-Tukey.R'
  Comparing 'regtest-Tukey.Rout' to 'regtest-Tukey.Rout.save' ... OK
  Running 'regtest-anova.R'
  Comparing 'regtest-anova.Rout' to 'regtest-anova.Rout.save' ... OK
  Running 'regtest-fixest.R'
  Running 'regtest-interface-extended.R'
  Comparing 'regtest-interface-extended.Rout' to 'regtest-interface-extended.Rout.save' ... OK
  Running 'regtest-interface.R'
  Comparing 'regtest-interface.Rout' to 'regtest-interface.Rout.save' ... OK
  Running 'regtest-lme.R'
  Comparing 'regtest-lme.Rout' to 'regtest-lme.Rout.save' ...67,71d66
< Warning message:
< In Matrix.DeprecatedCoerce(cd1, cd2) :
<   'as(, "dpoMatrix")' is deprecated.
< Use 'as(as(as(., "dMatrix"), "posdefMatrix"), "unpackedMatrix")' instead.
< See help("Deprecated") and help("Matrix-deprecated").
  Running 'regtest-mmm.R'
  Comparing 'regtest-mmm.Rout' to 'regtest-mmm.Rout.save' ... OK
  Running 'regtest-survival.R'
  Comparing 'regtest-survival.Rout' to 'regtest-survival.Rout.save' ... OK
 [16s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [55s] OK
* checking PDF version of manual ... OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 2 NOTEs
See
  'R:/run/building/build_2025-01-29-15-44/RF_PKG_CHECK/PKGS/multcomp.Rcheck/00check.log'
for details.

Run time: 170.59 seconds.