SCM

[#275] global renaming of functions

Date:
2008-12-24 03:05
Priority:
3
State:
Closed
Submitted by:
Ben Bolker (bbolker)
Assigned to:
Thibaut Jombart (jombart)
Target Version:
v. 0.5
Summary:
global renaming of functions

Detailed description
current proposed
ancestor
ancestors?
attach_data attachData
check_data checkData
check_phylo4 checkPhylo4
check_tree checkTree
children
descendants?
edgeLabels edgeLabel?
edgeLength
edgeOrder
edges edge?
extractTree
DropTip dropTip
getedges getEdge
getNode
hasEdgeLabels hasEdgeLabel?
hasEdgeLength
hasNodeData
hasNodeLabels hasNodeLabel?
hasPoly
hasRetic
hasSingles hasSingle
isRooted
labels
labels label?
MRCA mrca?
nEdges nEdge
nNodes nNode
nTips nTip
nodeId
nodeLabels nodeLabel?
nodeType
orderIndex
readNexus
rootNode
shortestPath
siblings?
sumEdgeLength
treePlot

Comments:

Message  ↓
Date: 2009-08-20 16:06
Sender: Ben Bolker

I think this is done?

Date: 2008-12-27 22:33
Sender: Ben Bolker

additionally: if Francois' suggestion is accepted, also rename c("tip","node","allnode") to c("tip", "internal", "all") throughout [may be in a different order -- the point is that these are options for functions/methods like labels

Attached Files:

Changes

Field Old Value Date By
close_date2009-08-21 14:292009-08-21 14:29bbolker
status_idOpen2009-08-21 14:29bbolker
assigned_tonone2009-01-18 17:28jombart
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