Software Map
Tag cloud  Project Tree  Project List
ANOVA Bayesian Bioinformatics Bioinformatics & Biostatistics Biostatistics C++ Cancer Chemoinformatics Classification Clustering Copynumber DNA Ecology Economics Finance GUI Genetic Algorithms Genetics HTML Machine Learning Machine learning Mixture Multiple Comparisons Multivariate Analysis Multivariate Regression Multivariate Techniques Next generation Sequencing ODE Phylogeny R RForge Rcmdr Regression SNP Statistics Time series Visualization Wholegenome bioinformatics biostatistics break detection categorical change detection classification clustering community ecology data mining database datasets dissimilarity distance distributions diversity dynamic systems ecological models ecology econometrics economics epidemiology finance gene expression generalized linear models genetics graphics high dimentional data likelihood linear models linear programming machine learning microarray missing data missing values mixed effect models mixed model model comparison model estimation model selection movement multivariate multivariate regression multivariate statistics nonparametrics nonlinear models nonparametric optimization parametric model permutation tests phylogeny plotting prediction psychology raster regression remote sensing reporting robust robust statistics simulation soil spatial spatial autocorrelation spatial classes spatial data spatial methods spatial point patterns spatial regression spatiotemporal species distribution models stochastic processes survival teaching text mining time series visualization
13 projects in result set.
Augmented Prediction and Variable Select  The project is be focused on the development of R wrappers for glmnet package in order to evaluate the added value of multiple predictors set to the predictive model. In addition the quality of variable selection would be evaluated.  
Tags: Multivariate Analysis, Multivariate Regression, PCA, Prediction, R, Rcpp, group lasso, lasso, model selection, regularization, sparse group lasso  
This project has not yet categorized itself in the Trove Software Map  Activity Percentile: 0 Activity Ranking: 0 Registered: 20141106 13:42 
Bayes factors  R functions for the computation of Bayes factors in common psychological experimental designs  
Tags: ANOVA, Bayesian, linear models, marginal likelihood, mixed effect models, model comparison, model estimation, model selection, regression  

Activity Percentile: 0 Activity Ranking: 0 Registered: 20090929 14:02 
Diagnostic and prognostic metaanalysis  This package provides functions for diagnostic and prognostic metaanalyses. It estimates univariate, bivariate and multivariate models, and allows the aggregation of previously published prediction models with new data.  
Tags: metaanalysis, reitsma, riley, debray, bivariate, univarite, multivariate, fixed, random, diagnostic, prognostic, R, MCMC, Statistics, model comparison, model evaluation, model performance, model selection, prediction, regression  

Activity Percentile: 86 Activity Ranking: 6 Registered: 20120809 13:01 
Fast kernel changepoint procedure  This package implements the Kernseg procedure described in the paper "New efficient algorithms for multiple changepoint detection with kernels (A. Celisse, G. Marot, M. PierreJean, G. Rigaill) available at https://arxiv.org/abs/1710.04556  
Tags: reproducing kernel, Bioinformatics & Biostatistics, Biostatistics, CNV, Copy number variant, Copynumber, Statistics, Time series, bioinformatics, biostatistics, break detection, breakpoint, change detection, change point, changepoint, dynamic programming, machine learning, model selection, multivariate analysis, multivariate statistics, nonparametric, segmentation, time series  
This project has not yet categorized itself in the Trove Software Map  Activity Percentile: 0 Activity Ranking: 0 Registered: 20171218 14:11 
Finite Mixure of AFT and FMR models  FMRS package provides estimation and variable selection in Finite Mixture of Accelerated Failure Time Regression (FMAFTR) and Finite Mixture of Regression (FMR) models with a large number of covariates and/or right censoring and heterogeneous structure.  
Tags: Bioinformatics, Biostatistics, C++, Cancer, Medical Science, Mixture, Next generation Sequencing, R, Regression, Statistics, lasso, model estimation, model selection, penalized regression, regularization, survival, tuning parameters, variable selection  

Activity Percentile: 0 Activity Ranking: 0 Registered: 20160307 02:31 
MAMI  MAMI: An Rpackage which performs model selection/averaging on multiply imputed datasets and combines the resulting estimates. The package also provides access to less frequently used model averaging techniques and offers integrated bootstrap estimation.  
Tags: imputation, missing data, model averaging, model selection, multiple imputation  
This project has not yet categorized itself in the Trove Software Map  Activity Percentile: 0 Activity Ranking: 0 Registered: 20151102 12:40 
Mixed Tempered Stable Distribution  This package provides detailed functions for univariate Mixed Tempered Stable distribution distribution with Gamma mixing density. The package contains routine for mle estimation, for the computation of density, probability, quantile and random numbers  
Tags: Finance, Mixture, density estimation, finance, model selection  
This project has not yet categorized itself in the Trove Software Map  Activity Percentile: 0 Activity Ranking: 0 Registered: 20140721 14:47 
MuMIn  multimodel inference  This package contains functions for model selection and model averaging based on information criteria (AICc, AIC or alike).  
Tags: model selection, model averaging, linear models, generalized linear models, GLM, R, R package, Statistics, linear mixed effects  

Activity Percentile: 56 Activity Ranking: 17 Registered: 20090130 14:25 
Nonlinear models in agriculture  This project is an R package to support a publication related to nonlinear regression models in agriculture. The package contains some new selfStarter functions, data and documentation.  
Tags: Regression, model selection, nonlinear models  
This project has not yet categorized itself in the Trove Software Map  Activity Percentile: 0 Activity Ranking: 0 Registered: 20130214 22:34 
VineCopula  This package provides functions for statistical inference of vine copulas. It contains tools for bivariate exploratory data analysis, bivariate copula selection, vine model selection, sampling and plotting.  
Tags: bivariate copula, multivariate copula, Rvine, statistical inference, model selection  
This project has not yet categorized itself in the Trove Software Map  Activity Percentile: 0 Activity Ranking: 0 Registered: 20130307 16:24 
Yuima Project  The project for simulation and inference of multidimensional stochastic differential equations.  
Tags: finance, stochastic processes, stochastic differential equation, estimation, time series, model selection, change point, Bayesian, Finance, MCMC, Monte Carlo, Statistics, change detection, changepoint, dynamic systems, inference, likelihood, option, option pricing, simulation, simulations, statistical inference, statistics, stochastic, stochastic differential equations  

Activity Percentile: 0 Activity Ranking: 0 Registered: 20090928 11:24 
lassovar  Estimation and forecasting of multiple time series (VAR) using regularized estimators. Main focus on Lasso and variants.  
Tags: Multivariate Regression, large data, model estimation, model selection, regularization  
This project has not yet categorized itself in the Trove Software Map  Activity Percentile: 0 Activity Ranking: 0 Registered: 20130116 16:08 
modEvA  modEvA is an R package for species distribution model evaluation and analysis.  
Tags: model performance, model evaluation, Ecological niche modeling, GLM, Multivariate Analysis, Multivariate Regression, Multivariate Techniques, agreement, bivariate analysis, calibration, ecological Inference, ecological models, false discovery rate, generalized linear models, logistic, model, model comparison, model estimation, model selection, multivariate, multivariate regression, optimization, positive predictive value, sensitivity, species distribution models, specificity, variance partitioning  

Activity Percentile: 0 Activity Ranking: 0 Registered: 20140404 11:51 