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ANOVA Bayesian Bioinformatics Bioinformatics & Biostatistics Biostatistics C++ Cancer Chemoinformatics Classification Clustering Copynumber DNA Ecology Economics Finance GUI Genetic Algorithms Genetics HTML Machine Learning Machine learning Mixture Multiple Comparisons Multivariate Analysis Multivariate Regression Multivariate Techniques Next generation Sequencing ODE Phylogeny R R-Forge Rcmdr Regression SNP Statistics Time series Visualization Whole-genome bioinformatics biostatistics break detection categorical change detection classification clustering community ecology data mining database datasets dissimilarity distance distributions diversity dynamic systems ecological models ecology econometrics economics epidemiology finance gene expression generalized linear models genetics graphics high dimentional data likelihood linear models linear programming machine learning microarray missing data missing values mixed effect models mixed model model comparison model estimation model selection movement multivariate multivariate regression multivariate statistics non-parametrics nonlinear models nonparametric optimization parametric model permutation tests phylogeny plotting political analysis prediction psychology raster regression remote sensing reporting robust robust statistics simulation soil spatial spatial autocorrelation spatial classes spatial data spatial methods spatial point patterns spatial regression spatio-temporal species distribution models survival teaching text mining time series visualization

42 projects in result set. Displaying 20 projects per page. Projects sorted by alphabetical order.
<1> <2> <3>
SoilR - The objective of this project is the development of an R package for modeling soil organic matter decomposition. The package contains a collection of different functions commonly used to represent soil organic matter dynamics.
Tags: Ecology, ODE, dynamic systems, ecological models, ecology, simulation, soil
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-01-17 15:38

Species Abundance Distributions - Tools to fit and compare models of species abundance distribution using likelihood-based methods
Tags: community ecology, diversity, ecology, species abundance model, Ecology

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-01-24 12:50

Structure-Time Diagram - The STdiag package is designed to provide efficient tools to simply plot a structure-time diagram to represent dynamics of a structured time series.
Tags: Time series, structured data, population dynamics, structured population, Ecology, R, R-Forge, ecology, graphics, plotting, spatial, spatial data, spatio-temporal

Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-10-25 13:03

T-LoCoH - T-LoCoH is a method for constructing home ranges and exploring spatio-temporal patterns in movement data. Tailored for GPS data, it can produce maps of time use and behavior indices. General purpose functions including data cleaning and animations.
Tags: home range, animal, movement, ecology, utilization distribution, hull, spatio-temporal, spatial, GPS, time use, Ecology

Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-03-12 23:47

T-LoCoH Development - Functions and features for core T-LoCoH that are under development or experimental.
Tags: GPS, animal, ecology, home range, hull, movement, spatial, spatio-temporal, time use, utilization distribution
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2014-10-11 15:09

bat - Biodiversity Assessment Tools - An R package useful for biodiversity assessment, including: - Taxon, phylogenetic and functional dimensions of alpha and beta diversity - Accumulation curves for all measures - Diversity estimation from incomplete sampling - Beta diversity partition
Tags: beta diversity, community ecology, dissimilarity, diversity, diversity partitioning, ecology, extrapolated richness, functional diversity, species accumulation, taxonomic diversity, phylogenetic diversity, biodiversity estimation

Activity Percentile: 0
Activity Ranking: 0
Registered: 2014-05-14 11:14

cardidates - Peaks in Environm. Series - cardidates: Methods for Peak Identification in Environmental Time Series
Tags: time series, peak identification, ecology

Activity Percentile: 0
Activity Ranking: 0
Registered: 2008-12-12 11:07

cati - Community Assembly by Trait: Individuals and beyond
Tags: community ecology, ecology, traits, indiduals, niche, null model, species pool

Activity Percentile: 0
Activity Ranking: 0
Registered: 2014-03-05 11:27

cusp - Package for applying Cobb's maximum likelihood method to fitting cusp catastrophe models to data. The package was published in the Journal of Statistical Software [see www.jstatsoft.org/v32/i08/paper].
Tags: cusp bifurcation, Ecology, Multivariate Analysis, Multivariate Regression, Multivariate Techniques, R, Regression, biostatistics, community ecology, fold bifurcation, hysteresis, model estimation, multivariate, multivariate regression, multivariate statistics, nonlinear equations, nonlinear models, political analysis, political science, psychology, psychometrics, regression, catastrophic shifts, critical transitions, dynamic systems, ecology, regime shifts

Activity Percentile: 0
Activity Ranking: 0
Registered: 2014-10-29 16:43

dcr - Data Cloning in R - Data cloning (DC) uses Bayesian MCMC to make maximum likelihood inference of complex hierarchical models. The bundle includes basic infrastructure for DC with parallel computing support, and more specialized packages for ecology.
Tags: data cloning, likelihood, optimization, Bayesian, ecology, mixed model

Activity Percentile: 0
Activity Ranking: 0
Registered: 2009-08-17 16:25

dismo --- Species Distribtion modeling - Functions for species distribution modeling.
Tags: ecology, spatial, spatial data, species distribution models

Activity Percentile: 0
Activity Ranking: 0
Registered: 2009-12-07 07:49

fuzzySim - fuzzySim is an R package for calculating fuzzy similarity in species occurrence patterns.
Tags: R, similarity, species distributions, spatial, ecology, binary data, fuzzy, fuzzy sets, fuzzy logic, classification, clustering, favourability model, trend surface analysis, FDR, VIF

Activity Percentile: 0
Activity Ranking: 0
Registered: 2014-02-27 18:53

general multiple-table data management - Our objective is to develop classes of objects that (1) make handling multiple-table data sets easier and (2) seamlessly integrate with existing R plotting and model-fitting functions; our philosophy is to keep data management and data analysis separate.
Tags: Ecology, community ecology, database, ecology, high dimentional data

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-07-27 02:07

grainscape - Grains of connectivity, minimum planar graph modelling of landscape connectivity using resistance surfaces Currently requires a window-based platform. Distributed with SELES software.
Tags: raster, ecology

Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-03-07 12:18

pcurve: principal curves - Package pcurve fits principal curves in high dimensions. It can be thought of as a non-linear form of PCA. pcurve is an R port of Glenn De'aths pcurve library for S-Plus.
Tags: principal curves, ordination, Ecology, Machine Learning, Multivariate Analysis, Multivariate Regression, Multivariate Techniques, community ecology, constrained ordination, ecological models, ecology, environmetrics, machine learning, multivariate, multivariate regression, multivariate smoothing, multivariate statistics

Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-05-30 16:42

picante - PICANTE: Phylocom integration, community analyses, null-models, traits and evolution in R
Tags: beta diversity, community ecology, diversity, ecology, phylogeny

Activity Percentile: 0
Activity Ranking: 0
Registered: 2008-01-16 22:15

plantlist: Looking Up Plant APG Families - Looking up APGIII Families and check of Synonyms for plants
Tags: ecology, Phylogeny, phylogenetic diversity, phylogeny, environmetrics, Conservation, Ecological monitoring, Evolution, biodiversity, bioinformatics
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 34
Activity Ranking: 30
Registered: 2015-03-20 06:26

simecol - Ecological Models with R - simecol allows to implement ecological models (ODEs, IBMs, ...) using a template-like object-oriented stucture. It helps to organize scenarios and may also be useful for other areas.
Tags: dynamic systems, differential equations, individual-based models, ODE, IBM, ecology, simulation, ecological models

Activity Percentile: 0
Activity Ranking: 0
Registered: 2008-02-20 20:34

surveillance - The R-package 'surveillance' is a framework for the development of statistical methods for the modeling and change-point detection in time series of counts, proportions and categorical data as well as continuous-time epidemic like point process phenomena.
Tags: Ecology, autocorrelation, biostatistics, break detection, categorical, change detection, disease mapping, dynamic systems, ecology, event histories, model specification, regression, spatial, spatial data, spatial methods, spatio-temporal, spatio-temporal point patterns

Activity Percentile: 98
Activity Ranking: 2
Registered: 2007-06-19 14:46

the CTDS Movement Modeling - The 'ctds' package provides code to fit a continuous-time, discrete-space model to animal movement data, such as telemetry or GPS data. Potential drivers of animal movement include landscape features, environmental covariates, and conspecifics.
Tags: Ecology, ecological models, ecology, individual-based models, movement, raster
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-10-15 21:04

42 projects in result set. Displaying 20 projects per page. Projects sorted by alphabetical order.
<1> <2> <3>
Thanks to:
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