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ANOVA Bayesian Bioinformatics Bioinformatics & Biostatistics Biostatistics C++ Cancer Chemoinformatics Classification Clustering Copynumber DNA Ecology Economics Finance GUI Genetic Algorithms Genetics HTML Machine Learning Machine learning Mixture Multiple Comparisons Multivariate Analysis Multivariate Regression Multivariate Techniques Next generation Sequencing ODE Phylogeny R R-Forge Rcmdr Regression SNP Statistics Time series Visualization Whole-genome bioinformatics biostatistics break detection categorical change detection classification clustering community ecology data mining database datasets dissimilarity distance distributions diversity dynamic systems ecological models ecology econometrics economics epidemiology finance gene expression generalized linear models genetics graphics high dimentional data likelihood linear models linear programming machine learning microarray missing data missing values mixed effect models mixed model model comparison model estimation model selection movement multivariate multivariate regression multivariate statistics non-parametrics nonlinear models nonparametric optimization parametric model permutation tests phylogeny plotting political analysis prediction psychology raster regression remote sensing reporting robust robust statistics simulation soil spatial spatial autocorrelation spatial classes spatial data spatial methods spatial point patterns spatial regression spatio-temporal species distribution models survival teaching text mining time series visualization

17 projects in result set.
A cookbook of epidemiological models - This package aims to provide a large, diverse set of mathematical models developed in R, including both deterministic and stochastic models, and approaches to parameter estimation.
Tags: epidemiology, IBM, ODE, differential equations, dynamic systems, individual-based models, simulation
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-05-08 13:59

Early Warning Signals Toolbox - The Early-Warning-Signals Toolbox provides to the general practitioner available methods for estimating statistical changes in timeseries that can be used for the in-time identification of critical transitions.
Tags: resilience, leading indicators, regime shifts, critical transitions, fold bifurcation, autocorrelation, variance, skewness, catastrophic shifts, hysteresis, R, R-Forge, dynamic systems, ecology, non-parametrics, nonlinear equations, spatial autocorrelation, spatial data, spatial methods, time series, tipping points, wavelet

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-12-20 21:58

Iterated Function Systems - Iterated Function Systems - IFS estimator
Tags: density estimation, distributions, dynamic systems, estimation
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2015-08-21 21:39

Multivariate Functional Regression - Estimation of functional regression with multiple functionnal regressors and optimal selection of the smoothing parameters and the number of basis. It also includes the treatment of strictly positive functional data.
Tags: dynamic systems, multivariate, nonparametric, semiparametric model

Activity Percentile: 0
Activity Ranking: 0
Registered: 2016-06-10 21:14

ODE Solvers Compiled On-Demand - The odeintr package generates compiled ODE solvers on-demand. It uses the Boost odeint library and Rcpp.
Tags: C++, Ecology, Economics, Fast, Fisheries, Forestry, HPC, ODE, R, Rcpp, dynamic systems, ecological models, ordinary differential equations, simulation, solver
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2015-05-06 21:14

R functions for functional data analysis - The ‘fda’ package includes functions and data sets for functional data analysis as described in Ramsay, J. O. and Silverman, B. W. (2005) Functional Data Analysis (Springer) and (2002), Applied Functional Data Analysis (Springer).
Tags: fda, nonparametric, differential equations, dynamic systems, multivariate, semiparametric model

Activity Percentile: 0
Activity Ranking: 0
Registered: 2008-01-18 03:15

RNetLogo - RNetLogo is an interface to the agent-based modelling plattform NetLogo. NL can be embedded into the R environment with headless (no GUI) and interactive GUI mode. It provides functions to load models, execute commands and to get values from reporters.
Tags: agent-based Model, Animal, Artificial Neural Network, Ecology, Economics, Fisheries, R, dynamic systems, individual-based models, individual-based-model, political analysis, population dynamics

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-08-19 15:59

Simulation of stochastic kinetic models - This package was developed for the book chapter in "In silico Systems Biology: A systems-based approach to understanding biological processes" published by Humana Press. This book is part of the Methods in Molecular Biology series.
Tags: dynamic systems
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-10-02 08:40

SoilR - The objective of this project is the development of an R package for modeling soil organic matter decomposition. The package contains a collection of different functions commonly used to represent soil organic matter dynamics.
Tags: Ecology, ODE, dynamic systems, ecological models, ecology, simulation, soil
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-01-17 15:38

Spatial dynamic modeling - spdynamic is a framework to implement spatially-explicit dynamic simulation models. This package provides easy to use functions to organize scenarios of spatial dynamic simulations as well as read, visualize and access spatio-temporal data in the models.
Tags: dynamic systems, ecological models, spatial, spatio-temporal

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-11-25 08:45

Yuima Project - The project for simulation and inference of multidimensional stochastic differential equations.
Tags: finance, stochastic processes, stochastic differential equation, estimation, time series, model selection, change point, Bayesian, Finance, MCMC, Monte Carlo, Statistics, change detection, changepoint, dynamic systems, inference, likelihood, option, option pricing, simulation, simulations, statistical inference, statistics, stochastic, stochastic differential equations

Activity Percentile: 18
Activity Ranking: 38
Registered: 2009-09-28 11:24

cusp - Package for applying Cobb's maximum likelihood method to fitting cusp catastrophe models to data. The package was published in the Journal of Statistical Software [see www.jstatsoft.org/v32/i08/paper].
Tags: cusp bifurcation, Ecology, Multivariate Analysis, Multivariate Regression, Multivariate Techniques, R, Regression, biostatistics, community ecology, fold bifurcation, hysteresis, model estimation, multivariate, multivariate regression, multivariate statistics, nonlinear equations, nonlinear models, political analysis, political science, psychology, psychometrics, regression, catastrophic shifts, critical transitions, dynamic systems, ecology, regime shifts

Activity Percentile: 0
Activity Ranking: 0
Registered: 2014-10-29 16:43

deSolve: Differential Equation Solvers - deSolve is a collection of solvers, mostly from the 'lsode' family of solvers. deSolve provides R interfaces to solvers for stiff and non-stiff systems, and can take system descriptions in R, or as defined in dynamically loaded compiled code.
Tags: ODE, differential equations, dynamic systems, ecological models, economic, finance, solver

Activity Percentile: 0
Activity Ranking: 0
Registered: 2008-03-26 19:38

is2 - Inference methods using iterated smoothing for partially-observed Markov processes
Tags: Statistics, dynamic systems, inference, likelihood, stochastic differential equations, time series
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2015-04-07 21:34

qualV - Qualitative Validation Criteria - Package qualV provides quantitative and qualitative criteria to compare models with data and to measure similarity of patterns. Specific attention is payed to problems with systematic differences and time shifts.
Tags: model comparison, dynamic systems

Activity Percentile: 0
Activity Ranking: 0
Registered: 2008-02-28 15:45

simecol - Ecological Models with R - simecol allows to implement ecological models (ODEs, IBMs, ...) using a template-like object-oriented stucture. It helps to organize scenarios and may also be useful for other areas.
Tags: dynamic systems, differential equations, individual-based models, ODE, IBM, ecology, simulation, ecological models

Activity Percentile: 0
Activity Ranking: 0
Registered: 2008-02-20 20:34

surveillance - The R-package 'surveillance' is a framework for the development of statistical methods for the modeling and change-point detection in time series of counts, proportions and categorical data as well as continuous-time epidemic like point process phenomena.
Tags: Ecology, autocorrelation, biostatistics, break detection, categorical, change detection, disease mapping, dynamic systems, ecology, event histories, model specification, regression, spatial, spatial data, spatial methods, spatio-temporal, spatio-temporal point patterns

Activity Percentile: 0
Activity Ranking: 0
Registered: 2007-06-19 14:46

Thanks to:
Vienna University of Economics and Business University of Wisconsin - Madison Powered By FusionForge