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ANOVA Artificial Neural Network Bayesian Bioinformatics Bioinformatics & Biostatistics Biostatistics C++ Cancer Chemoinformatics Classification Clustering Copynumber DNA Ecological niche modeling Ecology Economics Finance GDAL GUI Genetic Algorithms Genetics Graphical User Interface HPC Machine Learning Machine learning Multiple Comparisons Multivariate Analysis Multivariate Regression Multivariate Techniques Next generation Sequencing ODE Phylogeny R R-Forge Regression Sequence analysis Time series Visualization Whole-genome animal beta diversity bioinformatics biostatistics break detection categorical change detection classification clustering community ecology data mining database datasets dependence differential equations dissimilarity distance distributions diversity dynamic systems ecological models ecology econometrics economics educational tool environmetrics epidemiology finance gene expression generalized linear models genetics graphics high dimentional data likelihood linear models linear programming longitudinal data machine learning marginal likelihood microarray missing data missing values mixed effect models mixed integer programming mixed model model model comparison model estimation model selection model specification movement multivariate multivariate regression multivariate statistics network non-parametrics nonlinear equations nonlinear models nonparametric optimization ordination parametric model pattern recognition permutation tests phylogeny plotting political analysis population genetics prediction psychology raster regression remote sensing reporting resampling methods robust robust statistics sampling simulation social network analysis social networks soil spatial spatial autocorrelation spatial classes spatial data spatial econometrics spatial methods spatial operators spatial point patterns spatial regression spatio-temporal species distribution models spline statistical education survival taxonomic diversity teaching text mining time series trajectory trend analysis visualization

48 projects in result set. Displaying 20 projects per page. Projects sorted by alphabetical order.
<1> <2> <3>
ANN - This package provides a feedforward Artificial Neural Network (ANN) optimized by Genetic Algorithm (GA).
Tags: Artificial Neural Network, Machine Learning, C++, Finance, Genetic Algorithms, R
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-12-09 18:43

Benchmarking genomic data integration - Comparison pipeline for multi-platform data integration algorithms for functional genomics studies. Provides tools to compare performance between publicly available implementations
Tags: Bioinformatics, CCA, Cancer, Copynumber, Machine Learning, Machine learning, Multivariate Regression, Normalization, R, R-Forge, Whole-genome, analytics, biostatistics, comparative analysis, comparison, data mining, dependence, gene expression, machine learning, microarray, multivariate

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-02-02 00:51

Computational Statistics: Intro to R - Course material and supplements for a compact course on statistical computing, including an introduction to R.
Tags: Programming language, R, statistical education, education, textbook

Activity Percentile: 0
Activity Ranking: 0
Registered: 2008-02-06 16:41

Copulas modeling Multivariate Dependence - Copulas [elliptical (Gaussian and t), Archimedean, E.Value etc]. PDF, CDF, RN generation, plots. Several methods for fitting/estimation. Independence and serial independence tests, Goodness-of-fit. Nested Archimedean Copulas also for high dimensions
Tags: dependence, multivariate, R, copula, distributions

Activity Percentile: 75
Activity Ranking: 25
Registered: 2009-11-10 10:24

CorReg - find a structure explaining correlations between covariates and use it to compute linear regression. It provides an efficient new estimator for recursive SEM.
Tags: R, R-Forge, Regression, SemTools, Structural Equation Modelling, missing, missing data, missing values, missingness

Activity Percentile: 80
Activity Ranking: 20
Registered: 2013-11-14 14:32

DHclus - Divisive hierarchical clustering algorithm with automatic determination of components
Tags: R, clustering, data mining

Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-08-31 12:26

DeadCanMove - Locating roadkill hotspots is key to mitigate road impacts on wildlife, but study design can affect hotspot definition. The DeadCanMove R package contains functions to estimate how sampling scheme may affect the spatial accuracy of hotspot identification.
Tags: Ecology, R, animal, comparison, ecology

Activity Percentile: 22
Activity Ranking: 77
Registered: 2014-04-01 18:15

Design-based estimators for continua. - Design-based, one-phase and two-phase (regression, model-assisted) estimators for continuous populations. The project is motivated by and the package is being developed in connection with Czech National Forest Inventory (2011-2015, CZNFI2).
Tags: forestry, environmetrics, forest inventory, landscape inventory, design-based, model-assisted, survey sampling, sampling continuous populatios, R
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-04-06 21:49

Diagnostic and prognostic meta-analysis - This package provides functions for diagnostic and prognostic meta-analyses. It estimates univariate, bivariate and multivariate models, and allows the aggregation of previously published prediction models with new data.
Tags: meta-analysis, reitsma, riley, debray, bivariate, univarite, multivariate, fixed, random, diagnostic, prognostic, R

Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-08-09 13:01

Early Warning Signals Toolbox - The Early-Warning-Signals Toolbox provides to the general practitioner available methods for estimating statistical changes in timeseries that can be used for the in-time identification of critical transitions.
Tags: resilience, leading indicators, regime shifts, critical transitions, fold bifurcation, autocorrelation, variance, skewness, catastrophic shifts, hysteresis, R, R-Forge, dynamic systems, ecology, non-parametrics, nonlinear equations, spatial autocorrelation, spatial data, spatial methods, time series, tipping points, wavelet

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-12-20 21:58

Educational Assessment Tools - The package eat is designed to simplify data preparation and IRT modeling with the software ConQuest within the R programming environment. It includes routines for automation of data preprocessing and an interface to specify and run several IRT models.
Tags: IRT, ConQuest, Rasch, R, Rasch Model, wrapper

Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-01-18 16:07

GenABEL - A suite of packages for statistical genomics
Tags: Bioinformatics, R, meta-analysis, microarray experiment, mixed model

Activity Percentile: 78
Activity Ranking: 22
Registered: 2009-08-12 17:07

IPMpack - IPMpack uses demographic vital rate data and (optionally) environmental data to build integral projection models. The package includes diagnostic routines, provides classic matrix model output, and produces post-hoc metrics (e.g., life expectancy).
Tags: R, R-Forge, animal, biostatistics, comparative analysis, ecology, longitudinal data, model comparison, model estimation, projections, survival, time series, trajectory

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-12-10 16:04

Low Rank Gaussian Process Regression - Fit a Low Rank Gaussian Process Regression / Linear Mixed Model for large datasets. These models are widely used in statistical genetics as a test of association while correcting for the confounding effects of kinship and population structure.
Tags: C++, Genetics, high performance computing, R, Regression, parallel computing

Activity Percentile: 72
Activity Ranking: 28
Registered: 2013-12-19 15:12

NCCT-R - A package to be used in the analysis of ToxCast chemical screening data.
Tags: R, database, dbi, Bioinformatics & Biostatistics, HTS
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2014-06-26 02:19

ParallLogicReg - ParallLogicReg: an R library for analysis of SNP-SNP interaction using parallel computing.
Tags: R, Whole-genome, high performance computing
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-05-03 23:26

Patchwork - Allele-specific Copy-number analysis for whole-genome sequenced data in CompleteGenomics or BAM format.
Tags: Copynumber, Whole-genome, Cancer, R, Visualization, Bioinformatics

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-10-31 13:53

Predictive Modelling Markup Language - Export various models as Predictive Modelling Markup Language (PMML).
Tags: Artificial Neural Network, Boost, Classification, Clustering, Machine Learning, R
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-01-28 09:12

Probabilistic Suffix Trees - The PST library allows to fit and visualize Probabilistic Suffix Trees (PST), the construction that stores Variable Length Markov Chains (VLMC). Fitted PSTs can be used to predict, generate or impute categorical sequences.
Tags: R, data mining, sequence analysis, probabilistic suffix trees, variable length markov chains

Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-01-04 10:50

Quant-lab - A collection of function to valuate options, greeks, volatility, and other parameters used by traders. Vanna-Volga, realized and implied volatility, skewness, and kurtosis, volatility smile scenarios, P&L profiles, and other techniques are included.
Tags: options, vanna-volga, sticky-delta, Finance, Options, R, R-Forge
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2014-01-21 19:24

48 projects in result set. Displaying 20 projects per page. Projects sorted by alphabetical order.
<1> <2> <3>
Thanks to:
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