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ANOVA Artificial Neural Network Bayesian Bioinformatics C++ CCA Cancer Chemoinformatics Classification Clustering Copy number variant Copynumber DNA Ecology Finance GUI Genetic Algorithms Genetics Graphical User Interface HPC LaTeX Machine Learning Machine learning Multiple Comparisons Multivariate Analysis Multivariate Regression Multivariate Techniques Normalization ODE Phylogeny R R-Forge Rcmdr Regression Sequence analysis Sweave Visualization Whole-genome analytics beta diversity biostatistics break detection categorical change detection classification clustering community ecology copula data mining database datasets dependence differential equations disease mapping dissimilarity distance distribution diagnostics distributions diversity dynamic systems ecological models ecology finance gene expression generalized linear models graphics high dimentional data inference likelihood linear programming longitudinal data machine learning marginal likelihood meta-analysis microarray microarray experiment mixed effect models mixed integer programming mixed model model comparison model estimation model selection model specification movement multivariate multivariate statistics nonlinear equations nonlinear models nonlinear programming nonparametric optimization ordination parametric model pattern recognition phylogeny plotting political analysis psychology raster regression remote sensing reporting resampling methods robust statistics sampling semiparametric model sequence analysis simulation social networks soil spatial spatial autocorrelation spatial classes spatial data spatial econometrics spatial methods spatial point patterns spatial regression spatio-temporal species distribution models spline statistical education survival teaching text mining time series trajectory trend analysis visualization
31 projects in result set. Displaying 20 projects per page. Projects sorted by alphabetical order.
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| Benchmarking genomic data integration - Comparison pipeline for multi-platform data integration algorithms for functional genomics studies. Provides tools to compare performance between publicly available implementations | |
| Tags: Bioinformatics, CCA, Cancer, Copynumber, Machine Learning, Machine learning, Multivariate Regression, Normalization, R, R-Forge, Whole-genome, analytics, biostatistics, comparative analysis, comparison, data mining, dependence, gene expression, machine learning, microarray, multivariate | |
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Activity Percentile: 0 Activity Ranking: 0 Registered: 2011-02-02 00:51 |
| Computational Statistics: Intro to R - Course material and supplements for a compact course on statistical computing, including an introduction to R. | |
| Tags: Programming language, R, statistical education | |
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Activity Percentile: 0 Activity Ranking: 0 Registered: 2008-02-06 16:41 |
| Copulas modeling Multivariate Dependence - Copulas [elliptical (Gaussian and t), Archimedean, E.Value etc]. PDF, CDF, RN generation, plots. Several methods for fitting/estimation. Independence and serial independence tests, Goodness-of-fit. Nested Archimedean Copulas also for high dimensions | |
| Tags: dependence, multivariate, R, copula, distributions | |
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Activity Percentile: 77 Activity Ranking: 31 Registered: 2009-11-10 10:24 |
| DHclus - Divisive hierarchical clustering algorithm with automatic determination of components | |
| Tags: R, clustering, data mining | |
| This project has not yet categorized itself in the Trove Software Map | Activity Percentile: 0 Activity Ranking: 0 Registered: 2012-08-31 12:26 |
| Design-based estimators for continua. - Design-based, one-phase and two-phase (regression, model-assisted) estimators for continuous populations. The project is motivated by and the package is being developed in connection with Czech National Forest Inventory (2011-2015, CZNFI2). | |
| Tags: forestry, environmetrics, forest inventory, landscape inventory, design-based, model-assisted, survey sampling, sampling continuous populatios, R | |
| This project has not yet categorized itself in the Trove Software Map | Activity Percentile: 0 Activity Ranking: 0 Registered: 2013-04-06 21:49 |
| Diagnostic and prognostic meta-analysis - This package provides functions for diagnostic and prognostic meta-analyses. It estimates univariate, bivariate and multivariate models, and allows the aggregation of previously published prediction models with new data. | |
| Tags: meta-analysis, reitsma, riley, debray, bivariate, univarite, multivariate, fixed, random, diagnostic, prognostic, R | |
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Activity Percentile: 33 Activity Ranking: 89 Registered: 2012-08-09 13:01 |
| Early Warning Signals Toolbox - The Early-Warning-Signals Toolbox provides to the general practitioner available methods for estimating statistical changes in timeseries that can be used for the in-time identification of critical transitions. | |
| Tags: resilience, leading indicators, regime shifts, critical transitions, fold bifurcation, autocorrelation, variance, skewness, catastrophic shifts, hysteresis, R, R-Forge, dynamic systems, ecology, non-parametrics, nonlinear equations, spatial autocorrelation, spatial data, spatial methods, time series, tipping points, wavelet | |
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Activity Percentile: 0 Activity Ranking: 0 Registered: 2011-12-20 21:58 |
| Educational Assessment Tools - The package eat is designed to simplify data preparation and IRT modeling with the software ConQuest within the R programming environment. It includes routines for automation of data preprocessing and an interface to specify and run several IRT models. | |
| Tags: IRT, ConQuest, Rasch, R, Rasch Model, wrapper | |
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Activity Percentile: 0 Activity Ranking: 0 Registered: 2012-01-18 16:07 |
| GenABEL - A suite of packages for statistical genomics | |
| Tags: Bioinformatics, R, meta-analysis, microarray experiment, mixed model | |
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Activity Percentile: 89 Activity Ranking: 15 Registered: 2009-08-12 17:07 |
| IPMpack - IPMpack uses demographic vital rate data and (optionally) environmental data to build integral projection models. The package includes diagnostic routines, provides classic matrix model output, and produces post-hoc metrics (e.g., life expectancy). | |
| Tags: R, R-Forge, animal, biostatistics, comparative analysis, ecology, longitudinal data, model comparison, model estimation, projections, survival, time series, trajectory | |
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Activity Percentile: 81 Activity Ranking: 26 Registered: 2011-12-10 16:04 |
| Patchwork - Allele-specific Copy-number analysis for whole-genome sequenced data in CompleteGenomics or BAM format. | |
| Tags: Copynumber, Whole-genome, Cancer, R, Visualization, Bioinformatics | |
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Activity Percentile: 0 Activity Ranking: 0 Registered: 2011-10-31 13:53 |
| Predictive Modelling Markup Language - Export various models as Predictive Modelling Markup Language (PMML). | |
| Tags: Artificial Neural Network, Boost, Classification, Clustering, Machine Learning, R | |
| This project has not yet categorized itself in the Trove Software Map | Activity Percentile: 0 Activity Ranking: 0 Registered: 2013-01-28 09:12 |
| Probabilistic Suffix Trees - The PST library allows to fit and visualize Probabilistic Suffix Trees (PST), the construction that stores Variable Length Markov Chains (VLMC). Fitted PSTs can be used to predict, generate or impute categorical sequences. | |
| Tags: R, data mining, sequence analysis, probabilistic suffix trees, variable length markov chains | |
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Activity Percentile: 0 Activity Ranking: 0 Registered: 2012-01-04 10:50 |
| Quantitative Risk Management - This package is designed to accompany the book Quantitative Risk Management: Concepts, Techniques and Tools by Alexander J. McNeil, Rudiger Frey and Paul Embrechts. The package is a modfied version of the package 'QRMlib' (see CRAN archive). | |
| Tags: Finance, R, finance, time series | |
| This project has not yet categorized itself in the Trove Software Map | Activity Percentile: 0 Activity Ranking: 0 Registered: 2012-04-26 14:34 |
| R2MLwiN - R2MLwiN is an R command interface to the MLwiN multilevel modelling software package, allowing users to fit multilevel models using MLwiN from within the R environment. | |
| Tags: R, MLwiN, MCMC, IGLS, Bayesian, mixed model | |
| This project has not yet categorized itself in the Trove Software Map | Activity Percentile: 0 Activity Ranking: 0 Registered: 2013-02-10 13:19 |
| RHmm - Simulations and estimations of discrete, univariate or multivariate gaussian, mixture of univariate or multivariate gaussian hidden Markov models. | |
| Tags: C++, R | |
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Activity Percentile: 0 Activity Ranking: 0 Registered: 2007-10-22 08:05 |
| Rcpp - Seamless R and C++ Integration - The Rcpp package provides a C++ library which facilitates the integration of R and C++. R data types (SEXP) are matched to C++ objects in a class hierarchy. All R types are supported and each type is mapped to a dedicated class. | |
| Tags: C++, R, library | |
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Activity Percentile: 65 Activity Ranking: 47 Registered: 2008-03-01 16:33 |
| SciencePo - SciencePo is a R package drawn from a collection of functions for making the use of R in political science even more intuitive. The package aims to cover standard descriptive analyses for observational and experimental data. | |
| Tags: detail, detailBy, soundexBR, soundexFR, soundexES, rporb, rstack, IPC, accent, anonymize, tableau, descriptive, political science, Bayesian, R, datasets, distributions | |
| This project has not yet categorized itself in the Trove Software Map | Activity Percentile: 0 Activity Ranking: 0 Registered: 2013-01-02 11:44 |
| Structure-Time Diagram - The STdiag package is designed to provide efficient tools to simply plot a structure-time diagram to represent dynamics of a structured time series. | |
| Tags: Time series, structured data, population dynamics, structured population, Ecology, R, R-Forge, ecology, graphics, plotting, spatial, spatial data, spatio-temporal | |
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Activity Percentile: 0 Activity Ranking: 0 Registered: 2012-10-25 13:03 |
| Testing HWE for Multiallelic Genes - This package calculates plain and fully conditional P-values for the root-mean-square statistic, chi-square statistic, and log likelihood-ratio statistic for the user-provided genotype counts to be consistent with the Hardy-Weinberg equilibrium model. | |
| Tags: Bioinformatics, R, R-Forge, biostatistics, likelihood, model comparison | |
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Activity Percentile: 0 Activity Ranking: 0 Registered: 2012-07-03 03:50 |
31 projects in result set. Displaying 20 projects per page. Projects sorted by alphabetical order.
<1> <2>
