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ANOVA Bayesian Bioinformatics Bioinformatics & Biostatistics Biostatistics C++ Cancer Chemoinformatics Classification Clustering Copynumber DNA Ecology Economics Finance GDAL Genetic Algorithms Genetics Machine Learning Machine learning Multiple Comparisons Multivariate Analysis Multivariate Regression Multivariate Techniques Next generation Sequencing ODE Phylogeny R R-Forge Regression Time series Visualization Whole-genome animal bioinformatics biostatistics break detection categorical change detection classification clustering community ecology data mining database dependence dissimilarity distance distributions diversity dynamic systems ecological models ecology econometrics educational tool epidemiology finance gene expression generalized linear models graphics high dimentional data likelihood linear programming logistic machine learning microarray missing data missing values mixed effect models mixed model model model comparison model estimation model selection movement multivariate multivariate regression multivariate statistics nonparametric optimization parametric model permutation tests phylogeny political analysis population genetics psychology raster regression reporting robust robust statistics simulation social networks soil spatial spatial autocorrelation spatial classes spatial data spatial econometrics spatial methods spatial point patterns spatio-temporal species distribution models survival teaching text mining time series trajectory visualization

55 projects in result set. Displaying 20 projects per page. Projects sorted by alphabetical order.
<1> <2> <3>
ANN - This package provides a feedforward Artificial Neural Network (ANN) optimized by Genetic Algorithm (GA).
Tags: Artificial Neural Network, Machine Learning, C++, Finance, Genetic Algorithms, R
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-12-09 18:43

Benchmarking genomic data integration - Comparison pipeline for multi-platform data integration algorithms for functional genomics studies. Provides tools to compare performance between publicly available implementations
Tags: Bioinformatics, CCA, Cancer, Copynumber, Machine Learning, Machine learning, Multivariate Regression, Normalization, R, R-Forge, Whole-genome, analytics, biostatistics, comparative analysis, comparison, data mining, dependence, gene expression, machine learning, microarray, multivariate

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-02-02 00:51

Computational Statistics: Intro to R - Course material and supplements for a compact course on statistical computing, including an introduction to R.
Tags: Programming language, R, statistical education, education, textbook

Activity Percentile: 0
Activity Ranking: 0
Registered: 2008-02-06 16:41

Copulas modeling Multivariate Dependence - Copulas [elliptical (Gaussian and t), Archimedean, E.Value etc]. PDF, CDF, RN generation, plots. Several methods for fitting/estimation. Independence and serial independence tests, Goodness-of-fit. Nested Archimedean Copulas also for high dimensions
Tags: dependence, multivariate, R, copula, distributions

Activity Percentile: 0
Activity Ranking: 0
Registered: 2009-11-10 10:24

CorReg - find a structure explaining correlations between covariates and use it to compute linear regression. It provides an efficient new estimator for recursive SEM.
Tags: R, R-Forge, Regression, SemTools, Structural Equation Modelling, missing, missing data, missing values, missingness

Activity Percentile: 19
Activity Ranking: 82
Registered: 2013-11-14 14:32

DDIwR - This package provides functions to read DDI based metadata documentation, and write dedicated setup files for R, SPSS, Stata and SAS to read an associated .csv file containing the raw data, apply labels for variables and values and treat missing data.
Tags: DDI, metadata, setup files, SPSS, Stata, SAS, R

Activity Percentile: 0
Activity Ranking: 0
Registered: 2014-08-11 10:08

DHclus - Divisive hierarchical clustering algorithm with automatic determination of components
Tags: R, clustering, data mining

Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-08-31 12:26

DeadCanMove - Locating roadkill hotspots is key to mitigate road impacts on wildlife, but study design can affect hotspot definition. The DeadCanMove R package contains functions to estimate how sampling scheme may affect the spatial accuracy of hotspot identification.
Tags: Ecology, R, animal, comparison, ecology

Activity Percentile: 0
Activity Ranking: 0
Registered: 2014-04-01 18:15

Design-based estimators for continua. - Design-based, one-phase and two-phase (regression, model-assisted) estimators for continuous populations. The project is motivated by and the package is being developed in connection with Czech National Forest Inventory (2011-2015, CZNFI2).
Tags: forestry, environmetrics, forest inventory, landscape inventory, design-based, model-assisted, survey sampling, sampling continuous populatios, R
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-04-06 21:49

Diagnostic and prognostic meta-analysis - This package provides functions for diagnostic and prognostic meta-analyses. It estimates univariate, bivariate and multivariate models, and allows the aggregation of previously published prediction models with new data.
Tags: meta-analysis, reitsma, riley, debray, bivariate, univarite, multivariate, fixed, random, diagnostic, prognostic, R

Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-08-09 13:01

Early Warning Signals Toolbox - The Early-Warning-Signals Toolbox provides to the general practitioner available methods for estimating statistical changes in timeseries that can be used for the in-time identification of critical transitions.
Tags: resilience, leading indicators, regime shifts, critical transitions, fold bifurcation, autocorrelation, variance, skewness, catastrophic shifts, hysteresis, R, R-Forge, dynamic systems, ecology, non-parametrics, nonlinear equations, spatial autocorrelation, spatial data, spatial methods, time series, tipping points, wavelet

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-12-20 21:58

Educational Assessment Tools - The package eat is designed to simplify data preparation and IRT modeling with the software ConQuest within the R programming environment. It includes routines for automation of data preprocessing and an interface to specify and run several IRT models.
Tags: IRT, ConQuest, Rasch, R, Rasch Model, wrapper

Activity Percentile: 74
Activity Ranking: 27
Registered: 2012-01-18 16:07

Fast- and Frugal Trees [early alpha!] - A package for the analysis of Fast- and Frugal trees, simple classification trees with a simplistic structure. Create FF-trees manually, or via induction through bruteforce/chasing/monte carlo. ATTENTION : PRE-ALPHA STAGE.
Tags: Fast, Frugal, Tree, Classification, Fit, Clustering, R, classification, data mining, model evaluation
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 31
Activity Ranking: 70
Registered: 2014-10-07 10:23

GenABEL - A suite of packages for statistical genomics
Tags: Bioinformatics, R, meta-analysis, microarray experiment, mixed model

Activity Percentile: 71
Activity Ranking: 30
Registered: 2009-08-12 17:07

IPMpack - IPMpack uses demographic vital rate data and (optionally) environmental data to build integral projection models. The package includes diagnostic routines, provides classic matrix model output, and produces post-hoc metrics (e.g., life expectancy).
Tags: R, R-Forge, animal, biostatistics, comparative analysis, ecology, longitudinal data, model comparison, model estimation, projections, survival, time series, trajectory

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-12-10 16:04

Low Rank Gaussian Process Regression - Fit a Low Rank Gaussian Process Regression / Linear Mixed Model for large datasets. These models are widely used in statistical genetics as a test of association while correcting for the confounding effects of kinship and population structure.
Tags: C++, Genetics, high performance computing, R, Regression, parallel computing

Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-12-19 15:12

NCCT-R - A package to be used in the analysis of ToxCast chemical screening data.
Tags: R, database, dbi, Bioinformatics & Biostatistics, HTS
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2014-06-26 02:19

ParallLogicReg - ParallLogicReg: an R library for analysis of SNP-SNP interaction using parallel computing.
Tags: R, Whole-genome, high performance computing
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-05-03 23:26

Patchwork - Allele-specific Copy-number analysis for whole-genome sequenced data in CompleteGenomics or BAM format.
Tags: Copynumber, Whole-genome, Cancer, R, Visualization, Bioinformatics

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-10-31 13:53

Predictive Modelling Markup Language - Export various models as Predictive Modelling Markup Language (PMML).
Tags: Artificial Neural Network, Boost, Classification, Clustering, Machine Learning, R
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-01-28 09:12

55 projects in result set. Displaying 20 projects per page. Projects sorted by alphabetical order.
<1> <2> <3>
Thanks to:
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