Software Map
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5 projects in result set.
AVHRR probabilistic cloud and snow mask  This package consists of set of procedures used to preprocess land cover, DEM, surface skin temperature data, generate probabilistic cloud and snow mask for AVHRR satellite data, postclassify the results into a binary form, compute cloud shadow mask.  
Tags: raster, FNN, PCA, ICS  
This project has not yet categorized itself in the Trove Software Map  Activity Percentile: 0 Activity Ranking: 0 Registered: 20130325 08:10 
Augmented Prediction and Variable Select  The project is be focused on the development of R wrappers for glmnet package in order to evaluate the added value of multiple predictors set to the predictive model. In addition the quality of variable selection would be evaluated.  
Tags: Multivariate Analysis, Multivariate Regression, PCA, Prediction, R, Rcpp, group lasso, lasso, model selection, regularization, sparse group lasso  
This project has not yet categorized itself in the Trove Software Map  Activity Percentile: 0 Activity Ranking: 0 Registered: 20141106 13:42 
MixCluster  MixCluster performs the cluster analysis of mixedtype data by using a mixture model of Gaussian copulas. Thus, the intraclass dependencies are modelized and the onedimensional margins of the components follow classical distributions.  
Tags: Bayesian, Clustering, Estimation, Gibbs sampling, Machine Learning, Machine learning, Mixture, Multivariate Analysis, PCA, Visualisation, Visualization, clustering, copula, data mining, density estimation, mixed model, mixture, mixture model, mixture modelling, model estimation  
This project has not yet categorized itself in the Trove Software Map  Activity Percentile: 0 Activity Ranking: 0 Registered: 20140811 14:03 
Thresher  Thresher is a comprehensive, statistical approach to class discovery combining PCA with hierarchical clustering. It can (1) identify outliers, (2) estimate the number of subgroups, and (3) automate the selection of metrics and linkage rules.  
Tags: Bioinformatics, Clustering, Mixture, PCA, bioinformatics, clustering, dimension reduction  

Activity Percentile: 0 Activity Ranking: 0 Registered: 20140508 14:18 
plumbCNV: [see github: nicholasjcooper]  It has been shown that a comprehensive quality control battery for LogRRatio intensity data is needed to reduce the high false positive rate for rare CNV detection [Shtir et al, 2013]. PlumbCNV is an R package that automates this QC pipeline.  
Tags: CNV, CNP, SNP, QC, plumbCNV, PCA, bigmemory, bigalgebra, plink, penncnv, R, Copy number variant, microarray, illumina, affy  
This project has not yet categorized itself in the Trove Software Map  Activity Percentile: 0 Activity Ranking: 0 Registered: 20130207 14:22 