Software Map
Tag cloud  Project Tree  Project List
ANOVA Bayesian Bioinformatics Bioinformatics & Biostatistics Biostatistics C++ Cancer Chemoinformatics Classification Clustering Copynumber DNA Ecology Economics Finance GUI Genetic Algorithms Genetics HTML Machine Learning Machine learning Mixture Multiple Comparisons Multivariate Analysis Multivariate Regression Multivariate Techniques Next generation Sequencing ODE Phylogeny R RForge Rcmdr Regression SNP Statistics Time series Visualization Wholegenome bioinformatics biostatistics break detection categorical change detection classification clustering community ecology data mining database datasets dissimilarity distance distributions diversity dynamic systems ecological models ecology econometrics economics epidemiology finance gene expression generalized linear models genetics graphics high dimentional data likelihood linear models machine learning microarray missing data missing values mixed effect models mixed model model comparison model estimation model selection movement multivariate multivariate regression multivariate statistics nonparametrics nonlinear models nonparametric optimization parametric model permutation tests phylogeny plotting prediction psychology raster regression remote sensing reporting robust robust statistics simulation soil spatial spatial autocorrelation spatial classes spatial data spatial methods spatial point patterns spatial regression spatiotemporal species distribution models stochastic processes survival teaching text mining time series visualization
10 projects in result set.
Applied Predictive Modeling  The package is an R companion to the Springer book "Applied Predictive Modeling". It contains several functions and data sets used in the text, as well as R scripts to recreate the analyses in each chapter.  
Tags: Classification, Machine Learning, Machine learning, Regression, classification, machine learning, regression  
This project has not yet categorized itself in the Trove Software Map  Activity Percentile: 0 Activity Ranking: 0 Registered: 20130208 18:59 
Benchmarking genomic data integration  Comparison pipeline for multiplatform data integration algorithms for functional genomics studies. Provides tools to compare performance between publicly available implementations  
Tags: Bioinformatics, CCA, Cancer, Copynumber, Machine Learning, Machine learning, Multivariate Regression, Normalization, R, RForge, Wholegenome, analytics, biostatistics, comparative analysis, comparison, data mining, dependence, gene expression, machine learning, microarray, multivariate  

Activity Percentile: 0 Activity Ranking: 0 Registered: 20110202 00:51 
Class Prediction  A suite of packages that can bu used for "class prediction" problems. Includes tools to standardize trainingtesting regimens and crossvalidation schemes.  
Tags: Bioinformatics, Gene expression, Genetic Algorithms, Machine Learning, Machine learning, Multivariate Regression, SelfOrganizing Map, bioinformatics, classification, crossvalidation, gene expression, genetic algorithms, machine learning, model, prediction, validation  

Activity Percentile: 0 Activity Ranking: 0 Registered: 20140203 16:15 
Conditional Random Fields  This project provides a set of tools for conditional random fields tasks such as decoding/inference/sampling/training.  
Tags: Graphical model, Machine learning, CRF, MRF  

Activity Percentile: 0 Activity Ranking: 0 Registered: 20101228 07:13 
Dependency modeling toolbox  Modelbased tools for the discovery and analysis of statistical dependencies between data sources.  
Tags: Bayesian, CCA, Exponential, Machine Learning, Machine learning, analytics, dependence, machine learning, marginal likelihood, multivariate, pCCA, robust statistics  

Activity Percentile: 0 Activity Ranking: 0 Registered: 20100408 11:22 
Hierarchical RandomForest  An R package that runs randomForest as a local classifier at each parent node of a predefined treelike class hierarchy.  
Tags: Class Hierarchy, habitat, landcover, landuse, hierarchical, Classification, Ecology, Machine Learning, Machine learning, accuracy, bioinformatics, biostatistics, classification, ecological models, ecology, machine learning, outofbag, random forest  
This project has not yet categorized itself in the Trove Software Map  Activity Percentile: 0 Activity Ranking: 0 Registered: 20150115 14:20 
Layered and chained mixture models  Layered and chained mixture models for various univariate and multivariate distributions.  
Tags: Bioinformatics, Classification, Clustering, Fuzzy Sets, Graphical model, Machine Learning, Machine learning, Multivariate Analysis, Multivariate Techniques, Wholegenome, classification, clustering, copula, machine learning, mixed model, multivariate statistics, parametric model, mixture model  

Activity Percentile: 0 Activity Ranking: 0 Registered: 20110510 07:45 
MixCluster  MixCluster performs the cluster analysis of mixedtype data by using a mixture model of Gaussian copulas. Thus, the intraclass dependencies are modelized and the onedimensional margins of the components follow classical distributions.  
Tags: Bayesian, Clustering, Estimation, Gibbs sampling, Machine Learning, Machine learning, Mixture, Multivariate Analysis, PCA, Visualisation, Visualization, clustering, copula, data mining, density estimation, mixed model, mixture, mixture model, mixture modelling, model estimation  
This project has not yet categorized itself in the Trove Software Map  Activity Percentile: 0 Activity Ranking: 0 Registered: 20140811 14:03 
autoAnn  automatic annotation package, especially for MOOC dateset  
Tags: Machine Learning, Machine learning  
This project has not yet categorized itself in the Trove Software Map  Activity Percentile: 0 Activity Ranking: 0 Registered: 20150523 13:10 
stablelearner  An R package for assessing the stability of results from statistical learning.  
Tags: Machine Learning, Machine learning, Variables Selection, bootstrapping, machine learning, recursive partioning, resampling methods  
This project has not yet categorized itself in the Trove Software Map  Activity Percentile: 0 Activity Ranking: 0 Registered: 20160417 11:52 