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36 projects in result set. Displaying 20 projects per page. Projects sorted by alphabetical order.
<1> <2>
SoilR - We have moved to https://github.com/MPIBGC-TEE/SoilR-exp This repository is not maintained any more
Tags: Ecology, ODE, dynamic systems, ecological models, ecology, simulation, soil
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-01-17 15:38

Species Abundance Distributions - Tools to fit and compare models of species abundance distribution using likelihood-based methods
Tags: community ecology, diversity, ecology, species abundance model, Ecology

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-01-24 12:50

Species Distribution Modelling - sdm is an extendable framework to develop species distributions models using individual and community-based approaches, generate ensembles of models, evaluate the models, and predict species potential distributions in space and time.
Tags: Bioinformatics, Biostatistics, Ecology, Machine Learning, animal, community ecology, ensemble forecasting, raster, spatial, spatial data, spatial methods, species distribution models, species distributions

Activity Percentile: 0
Activity Ranking: 0
Registered: 2014-05-26 16:09

Structure-Time Diagram - The STdiag package is designed to provide efficient tools to simply plot a structure-time diagram to represent dynamics of a structured time series.
Tags: Time series, structured data, population dynamics, structured population, Ecology, R, R-Forge, ecology, graphics, plotting, spatial, spatial data, spatio-temporal

Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-10-25 13:03

T-LoCoH - T-LoCoH is a method for constructing home ranges and exploring spatio-temporal patterns in movement data. Tailored for GPS data, it can produce maps of time use and behavior indices. General purpose functions including data cleaning and animations.
Tags: home range, animal, movement, ecology, utilization distribution, hull, spatio-temporal, spatial, GPS, time use, Ecology

Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-03-12 23:47

Uncertainty Analysis for SDMs - usdm is a framework to assess the impact of different sources of uncertainties (e.g. positional uncertainty) on performance of species distribution models (SDMs).
Tags: Bioinformatics, Ecology, raster, spatial, spatial autocorrelation, spatial data, spatial methods, species distribution models

Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-09-17 00:05

VisCount - R package for training and evaluating visual count estimates
Tags: Count estimates, population size, team calibration, training, Ecology, birdwatching

Activity Percentile: 0
Activity Ranking: 0
Registered: 2014-07-07 14:36

cusp - Package for applying Cobb's maximum likelihood method to fitting cusp catastrophe models to data. The package was published in the Journal of Statistical Software [see www.jstatsoft.org/v32/i08/paper].
Tags: cusp bifurcation, Ecology, Multivariate Analysis, Multivariate Regression, Multivariate Techniques, R, Regression, biostatistics, community ecology, fold bifurcation, hysteresis, model estimation, multivariate, multivariate regression, multivariate statistics, nonlinear equations, nonlinear models, political analysis, political science, psychology, psychometrics, regression, catastrophic shifts, critical transitions, dynamic systems, ecology, regime shifts

Activity Percentile: 0
Activity Ranking: 0
Registered: 2014-10-29 16:43

ecospat - Miscellaneous methods and utilities for spatial ecology analysis, written by current and former members and collaborators of the ecospat group of Antoine Guisan, University of Lausanne, Switzerland.
Tags: Ecological niche modeling, Ecology, R
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2014-07-25 13:13

emon: ecological monitoring - R tools to help design and analyse ecological and environmental surveys (marine & benthic ecology). Statistical power; visual fast count estimator for underwater video surveys; semi-variogram; patch detection probability for spatial sampling designs.
Tags: Environmental monitoring, Ecological monitoring, Ecology
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2015-03-31 13:50

general multiple-table data management - Our objective is to develop classes of objects that (1) make handling multiple-table data sets easier and (2) seamlessly integrate with existing R plotting and model-fitting functions; our philosophy is to keep data management and data analysis separate.
Tags: Ecology, community ecology, database, ecology, high dimentional data

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-07-27 02:07

mvabund: multivariate analysis 4 ecology - A set of tools for displaying, modeling and analysing multivariate abundance data in community ecology.
Tags: Ecology, community ecology, generalized linear models, resampling methods, multivariate

Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-05-18 05:57

pcurve: principal curves - Package pcurve fits principal curves in high dimensions. It can be thought of as a non-linear form of PCA. pcurve is an R port of Glenn De'aths pcurve library for S-Plus.
Tags: principal curves, ordination, Ecology, Machine Learning, Multivariate Analysis, Multivariate Regression, Multivariate Techniques, community ecology, constrained ordination, ecological models, ecology, environmetrics, machine learning, multivariate, multivariate regression, multivariate smoothing, multivariate statistics

Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-05-30 16:42

rGeoJAGS - An R interface for use of the GeoJAGS module within JAGS Bayesian analysis software. This extends JAGS through the inclusion of families of Gaussian Markov Random Field models. Functions to format spatial data for analysis within BUGS are also included
Tags: GMRF, species distribution models, Ecology, Bayesian, spatial regression

Activity Percentile: 0
Activity Ranking: 0
Registered: 2015-02-06 13:03

surveillance - The R-package 'surveillance' is a framework for the development of statistical methods for the modeling and change-point detection in time series of counts, proportions and categorical data as well as continuous-time epidemic like point process phenomena.
Tags: Ecology, autocorrelation, biostatistics, break detection, categorical, change detection, disease mapping, dynamic systems, ecology, event histories, model specification, regression, spatial, spatial data, spatial methods, spatio-temporal, spatio-temporal point patterns

Activity Percentile: 83
Activity Ranking: 9
Registered: 2007-06-19 14:46

the CTDS Movement Modeling - The 'ctds' package provides code to fit a continuous-time, discrete-space model to animal movement data, such as telemetry or GPS data. Potential drivers of animal movement include landscape features, environmental covariates, and conspecifics.
Tags: Ecology, ecological models, ecology, individual-based models, movement, raster
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-10-15 21:04

36 projects in result set. Displaying 20 projects per page. Projects sorted by alphabetical order.
<1> <2>
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