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ANOVA Bayesian Bioinformatics Bioinformatics & Biostatistics Biostatistics C++ Cancer Chemoinformatics Classification Clustering Copynumber DNA Ecology Economics Finance Genetic Algorithms Genetics Machine Learning Machine learning Multiple Comparisons Multivariate Analysis Multivariate Regression Multivariate Techniques Next generation Sequencing ODE Phylogeny R R-Forge Regression Time series Visualization Whole-genome bioinformatics biostatistics break detection categorical change detection classification clustering community ecology data mining database dependence dissimilarity distance distributions diversity dynamic systems ecological models ecology econometrics educational tool epidemiology finance gene expression generalized linear models graphics high dimentional data likelihood linear programming machine learning microarray missing data missing values mixed effect models mixed model model comparison model estimation model selection multivariate multivariate regression multivariate statistics nonparametric optimization parametric model permutation tests phylogeny political analysis population genetics psychology raster regression reporting robust robust statistics simulation social networks soil spatial spatial autocorrelation spatial classes spatial data spatial econometrics spatial methods spatial point patterns spatio-temporal species distribution models survival text mining time series trajectory visualization

17 projects in result set.
ANN - This package provides a feedforward Artificial Neural Network (ANN) optimized by Genetic Algorithm (GA).
Tags: Artificial Neural Network, Machine Learning, C++, Finance, Genetic Algorithms, R
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-12-09 18:43

An R wrapper for PostgreSQL's libpq - This package provides easy access to advanced features of a PostgreSQL database. Key features include simple management of database cursors and asynchronous query processing, as well as R object serialization to and from a PostgreSQL database.
Tags: C++, PostgreSQL, database
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2014-06-30 17:00

Boost C++ Template Library Project - Boost provides free peer-reviewed portable C++ source libraries implemented mostly as templates. We place a subset of them in this package as a more efficient distribution system for CRAN.
Tags: Boost, C++, library, libraries, programming

Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-09-02 22:26

CNAV - A hidden Markov model approach is used to infer frequencies and haplotype phases of genotypes containing joint allelic and copy-number variation to be used in association studies.
Tags: Markov model, serial tempering, Gibbs sampling, Bayesian, Bioinformatics, Boost, C++, Genetics, bioinformatics, biostatistics, sampling
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-05-08 14:18

Clusterwise Effect Regression - This software implements an algorithm that proposes variable clustering within high dimensional linear and probit regression models. The estimation strategy is based on mixed Gibbs Sampling and Stochastic EM algorithm.
Tags: C++, Clustering, biostatistics, high dimentional data, multivariate regression, regression
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-08-20 09:47

Funclustering - This project is for creating an R package which proposes a model-based clustering algorithm for multivariate functional data. The package perform also functional PCA for univariate or multivariate functional data with differents weigths for each curves.
Tags: functional data, clustering, multivariate functional pca, EM, C++, Clustering, functional data analysis
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-08-05 16:38

Low Rank Gaussian Process Regression - Fit a Low Rank Gaussian Process Regression / Linear Mixed Model for large datasets. These models are widely used in statistical genetics as a test of association while correcting for the confounding effects of kinship and population structure.
Tags: C++, Genetics, high performance computing, R, Regression, parallel computing

Activity Percentile: 51
Activity Ranking: 47
Registered: 2013-12-19 15:12

MPAgenomics - This package contains an implementation of the lars algorithm for the lasso and fusion penalization. It works even if the number of covariate is greater than the number of individuals.
Tags: lasso, lars, sparse linear model, C++, genomic, Bioinformatics, Multivariate Analysis, Multivariate Regression, high dimentional data, low sample size high dimensional data, penalized regression

Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-04-18 16:20

Markov decision processes (MDPs) in R - Create and optimize MDPs with discrete time steps and state space. Both normal MDPs and hierarchical MDPs can be considered.
Tags: markov, optimization, stochastic, C++

Activity Percentile: 0
Activity Ranking: 0
Registered: 2009-06-08 12:06

R integration for the stk++ library - STK++ is a versatile, fast, reliable and elegant collection of C++ classes for statistics. Using rtkpp, R users and package developers will not need to install STK++ itself in order to use the library.
Tags: Rcpp, Linear Algebra, Clustering, classification, clustering, C++, library
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 89
Activity Ranking: 11
Registered: 2014-08-06 20:09

RHmm - Simulations and estimations of discrete, univariate or multivariate gaussian, mixture of univariate or multivariate gaussian hidden Markov models.
Tags: C++, R

Activity Percentile: 0
Activity Ranking: 0
Registered: 2007-10-22 08:05

Rcpp - Seamless R and C++ Integration - The Rcpp package provides a C++ library which facilitates the integration of R and C++. R data types (SEXP) are matched to C++ objects in a class hierarchy. All R types are supported and each type is mapped to a dedicated class.
Tags: C++, R, library

Activity Percentile: 0
Activity Ranking: 0
Registered: 2008-03-01 16:33

RcppProgress - This package allows to display a progress bar in the R console for long running computations taking place in c++ code, and provides support for interrupting those computations even in a multithreaded code
Tags: C++, package development

Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-05-07 16:44

abernethy reliability methods - Implementation of functions supporting reliability analyis methods presented in "The New Weibull Handbook" by Dr. Robert B. Abernethy.
Tags: Reliability, C++, R, Regression, Weibull, competing risks models, distribution diagnostics, likelihood, lognormal, optimization, parametric model, quantile regression, regression, sampling, survival, visualization

Activity Percentile: 41
Activity Ranking: 56
Registered: 2012-12-30 16:40

cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp
Tags: C++, Genetics, mixed model, openmp, parallel computing, Bioinformatics, Bioinformatics & Biostatistics, Biostatistics, Gibbs sampling, Regression

Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-05-29 18:34

phylobase - Defining the basic S4 classes and methods for representing and manipulating phylogenetic trees and data in R.
Tags: C++, Phylogeny

Activity Percentile: 0
Activity Ranking: 0
Registered: 2007-12-14 19:17

skycalc: Calculating the Sky Events - Calculating the Sky Events based on AAplus (Astronomical Algorithms), and generating figures that can be used in Almanacs.
Tags: astronomy, C++
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2014-01-08 13:34

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