SCM

SCM Repository

[directlabels] Annotation of /tex/useR-2011/TDHocking-longresume.tex
ViewVC logotype

Annotation of /tex/useR-2011/TDHocking-longresume.tex

Parent Directory Parent Directory | Revision Log Revision Log


Revision 417 - (view) (download) (as text)

1 : tdhock 417 \documentclass[11pt,a4paper]{article}
2 :     \usepackage{times,hyperref}
3 :     \usepackage{fullpage}
4 :     \usepackage{nopageno}
5 :    
6 :     \begin{document}
7 :    
8 :     \begin{tabular}{rcl}
9 :     {\Large Toby Dylan Hocking} & nationality: American &
10 :     phone: +33 1 39 63 54 99
11 :     \\
12 :     email: toby.hocking AT inria.fr & birth: 17 March 1984&
13 :     web: \url{http://cbio.ensmp.fr/~thocking}
14 :     \end{tabular}
15 :    
16 :     \subsection*{Publications, posters, talks}
17 :     \begin{itemize}
18 :     \item ``Sustainable package development using documentation generation,'' talk 21 October 2010 for semin-r, the Paris R user group.
19 :     \item
20 :     \href{http://www.plosone.org/article/info\%3Adoi\%2F10.1371\%2Fjournal.pone.0011913}{Gautier M, {\bf Hocking~TD}, Foulley JL.
21 :     A Bayesian Outlier Criterion to Detect SNPs under Selection in Large
22 :     Data Sets, \emph{PLoS ONE} 5(8): e11913 (2010).}
23 :     \item ``Visualizing
24 :     multivariate data using lattice and direct labels,'' talk 15 October
25 :     2009 for semin-r, the Paris R user group.
26 :     \item Sublogo dendrograms:
27 :     visualizing correlation in biological sequence motifs, poster
28 :     presented at
29 :     \href{http://www.agrocampus-ouest.fr/math/useR-2009/}{useR! 2009}.
30 :     \item \href{http://www.ncbi.nlm.nih.gov/pubmed/18500334}{Doyon~Y, McCammon~JM, Miller~JC, Faraji~F, Ngo~C,
31 :     Katibah~GE, Amora~R, {\bf Hocking~TD}, Zhang~L, \mbox{Rebar~EJ}, Gregory~PD,
32 :     Urnov~FD, Amacher~SL. Heritable targeted gene disruption in zebrafish
33 :     using designed zinc-finger nucleases, \emph{Nature~Biotechnology}
34 :     26, 702-708 (2008).
35 :     }
36 :     \end{itemize}
37 :    
38 :     \subsection*{Professional and research experience} \label{profexp}
39 :     \begin{description}
40 :    
41 :     \newcommand{\job}[4]{\item[#1, #2]\hrulefill\ #3 \\ #4}
42 :    
43 :     \job{Free software developer}{SourceForge.net,
44 :     R-Forge.R-project.org}{since November 2007}{
45 :     - \href{http://sf.net/projects/django-dataplot/}{Django-dataplot} for
46 :     statistical graphics on a web site using R, Python, and
47 :     Django.\\
48 :     - \href{http://sf.net/projects/gpsdb/}{GPSDB}, a Python
49 :     program for making websites for GPS data, and visualizing them using
50 :     Google Maps.\\
51 :     - \href{http://inlinedocs.r-forge.r-project.org/}{inlinedocs} R package for documentation generation based on comments in R code.\\
52 :     - \href{http://directlabels.r-forge.r-project.org}{directlabels} R package for automatic direct labeling of multicolor plots.\\
53 :     - \href{http://nicholsonppp.r-forge.r-project.org/}{nicholsonppp} R package for fitting a Bayesian model of evolution.\\
54 :     - \href{http://sublogo.r-forge.r-project.org/}{sublogo} R package for plotting sublogo dendrograms, for visualizing biological sequence alignment data.\\
55 :     - \href{https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=14518}{Patched the R interpreter} to support named capture in regular expressions using the PCRE library.
56 :     }
57 :    
58 :     \job{Research assistant}{Sangamo BioSciences, Richmond, CA}{June 2006
59 :     -- August 2008}{
60 :     Performed biochemical assays to determine sequence specificity of
61 :     DNA-binding proteins. \\
62 :     Designed protein linkers for optimal
63 :     nuclease activity and specificity. \\
64 :     Deployed an internal web
65 :     database for visualizing and comparing proteins and experiments.
66 :     }
67 :    
68 :     \job{General manager}{Open Computing Facility, Berkeley, CA}{October 2005 -- May 2006}{
69 :     Managed finances, personnel, and public relations for this student computer
70 :     center of over 10,000 users. \\
71 :     Installed and maintained software packages and helped users with
72 :     technical difficulties.
73 :     }
74 :    
75 :     \end{description}
76 :    
77 :     \subsection*{Programming skills}
78 :     Fortran, C, C++, Perl, Python, regular expressions, Emacs-Lisp, R,
79 :     SAS, HTML, SQL, PHP, CSS, \LaTeX, Subversion, Mercurial, Debian
80 :     systems administration.
81 :    
82 :     \subsection*{Language skills: English (mother tongue), French (fluent)}
83 :    
84 :     \subsection*{Education}
85 :     \begin{description}
86 :     \item[Ecole Normale Sup\'erieure, Paris, France, October 2009 -- 2012]
87 :     Doctoral research in statistical learning applied to computer vision
88 :     and bioinformatics with advisors Francis Bach and Jean-Philippe Vert.
89 :     \item[Pierre and Marie Curie University, Paris, France, September
90 :     2009] Masters of statistics with internship at INRA in
91 :     \href{http://nicholsonppp.r-forge.r-project.org/}{Bayesian statistics
92 :     applied to models of domestic animal evolution} with advisors Mathieu
93 :     Gautier and Jean-Louis Foulley.
94 :     \item[UC Berkeley, Spring 2006] Bachelors in molecular and cell
95 :     biology and statistics. Honors thesis with advisor Terry Speed on
96 :     chromosomal copy number analysis using SNP microarrays.
97 :     \end{description}
98 :    
99 :     \subsection*{Hobbies}
100 :     Playing saxophone and clarinet (since 1994), playing soccer (since 2006),
101 :     bicycle riding and touring (since 2007).
102 :    
103 :     \end{document}

root@r-forge.r-project.org
ViewVC Help
Powered by ViewVC 1.0.0  
Thanks to:
Vienna University of Economics and Business Powered By FusionForge