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Fri Jan 1 11:17:13 2016 UTC (3 years, 1 month ago) by deepayan
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Fri Jan 1 11:17:13 2016 UTC (3 years, 1 month ago) by deepayan
File size: 3374 byte(s)
cleanup based on feedback from R CMD check
\name{panel.quantile} \alias{panel.quantile} \title{ Plot a quantile regression line with standard error bounds. } \description{ Plot a quantile regression line with standard error bounds, using the \pkg{quantreg} package. This is based on the \code{\link[ggplot2]{stat_quantile}} function from \pkg{ggplot2}. } \usage{ panel.quantile(x, y, form = y ~ x, method = "rq", ..., tau = 0.5, ci = FALSE, ci.type = "default", level = 0.95, n = 100, col = plot.line$col, col.se = col, lty = plot.line$lty, lwd = plot.line$lwd, alpha = plot.line$alpha, alpha.se = 0.25, border = NA, superpose = FALSE, ## ignored: ## subscripts, group.number, group.value, type, col.line, col.symbol, fill, pch, cex, font, fontface, fontfamily) } \arguments{ \item{x, y}{ data points. If these are missing, they will be looked for in the environment of \code{form}. So in many cases you can skip these if passing \code{form}. In fact, for convenience, the formula can be passed as the first argument (i.e. \code{x}). } \item{form, method}{ the model is constructed (approximately) as \code{method(form, tau = tau, data = list(x=x, y=y), ...)}. See the Examples section for common choices. } \item{\dots}{ further arguments passed on to the model function (\code{method}), typically \code{\link[quantreg]{rq}}. } \item{tau}{ \var{p} values for the quantiles to estimate. Note: only one value for \code{tau} can be specified if estimating confidence intervals with \code{ci}. } \item{ci, ci.type, level}{ estimate a confidence interval at level \code{level} using the method \code{ci.type}; see \code{\link[quantreg]{predict.rq}}. } \item{n}{ number of equi-spaced points on which to evaluate the function. } \item{col, col.se, lty, lwd, alpha, alpha.se, border}{ graphical parameters. \code{col} and \code{alpha} apply to the line(s), while \code{col.se} and \code{alpha.se} apply to the shaded \code{ci} region. } \item{superpose}{ if \code{TRUE}, plot each quantile line (\code{tau}) in a different style (using \code{trellis.par.get("superpose.line")}). } \item{subscripts, group.number, group.value, type, col.line, col.symbol, fill, pch, cex, font, fontface, fontfamily}{ ignored. } } \details{ It is recommended to look at \code{vignette("rq", package="quantreg")}. } \author{ Felix Andrews \email{felix@nfrac.org} Based on \code{\link[ggplot2]{stat_quantile}} by Hadley Wickham. } \seealso{ \code{\link[quantreg]{rq}}, \code{\link{panel.smoother}}, \code{\link[ggplot2]{stat_quantile}} } \examples{ ## library("quantreg") set.seed(1) xy <- data.frame(x = runif(100), y = rt(100, df = 5)) xyplot(y ~ x, xy) + layer(panel.quantile(x, y, tau = c(.95, .5, .05))) if (require("splines")) { xyplot(y ~ x, xy) + layer(panel.quantile(y ~ ns(x, 3), tau = 0.9)) xyplot(y ~ x, xy) + layer(panel.quantile(y ~ ns(x, 3), tau = 0.9, ci = TRUE)) } xyplot(y ~ x, xy) + layer(panel.quantile(x, y, tau = c(.5, .9, .1), superpose = TRUE)) update(trellis.last.object(), auto.key = list(text = paste(c(50,90,10), "\% quantile"), points = FALSE, lines = TRUE)) ## seems not to work... #xyplot(y ~ x, xy) + # layer(panel.quantile(y ~ qss(x, lambda=1), method = "rqss")) } \keyword{ dplot }
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