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MetABEL log file (check_x86_64_linux)

Thu May 12 10:31:10 2022: Checking package MetABEL (SVN revision 2093) ...
* using log directory ‘/srv/rf/building/build_2022-05-12-10-30/RF_PKG_CHECK/PKGS/MetABEL.Rcheck’
* using R version 4.2.0 Patched (2022-05-10 r82335)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--as-cran’
* checking for file ‘MetABEL/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘MetABEL’ version ‘0.2-1’
* checking CRAN incoming feasibility ... Note_to_CRAN_maintainers
Maintainer: ‘L.C. Karssen ’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialization versions ... OK
* checking whether package ‘MetABEL’ can be installed ... [2s/2s] OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [4s/4s] NOTE
Found if() conditions comparing class() to string:
File ‘MetABEL/R/metagwa.files.R’: if (class(df) == "try-error") ...
File ‘MetABEL/R/metagwa.files.R’: if (class(dft) == "try-error") ...
Use inherits() (or maybe is()) instead.
* checking Rd files ... [0s/0s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... [0s/0s] OK
* checking PDF version of manual ... OK
* skipping checking HTML version of manual: no command ‘tidy’ found
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 1 NOTE
See
  ‘/srv/rf/building/build_2022-05-12-10-30/RF_PKG_CHECK/PKGS/MetABEL.Rcheck/00check.log’
for details.


Run time: 26.21 seconds.