R Development Page

NISTO log file (check_x86_64_windows)

* using log directory 'R:/run/building/build_2017-11-23-15-24/RF_PKG_CHECK/PKGS/NISTO.Rcheck'
* using R version 3.4.3 beta (2017-11-20 r73757)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--as-cran'
* checking for file 'NISTO/DESCRIPTION' ... OK
* this is package 'NISTO' version '2016-10-26'
* checking CRAN incoming feasibility ... NOTE
Maintainer: 'John C. Nash '

New submission

Version contains large components (2016-10-26)

Unknown, possibly mis-spelled, fields in DESCRIPTION:
  'LicenseDetails'

Strong dependencies not in mainstream repositories:
  optimrx

The Title field should be in title case, current version then in title case:
'Nonlinear least squares and function minimization examples from NIST'
'Nonlinear Least Squares and Function Minimization Examples from NIST'

The Date field is over a month old.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'NISTO' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... WARNING
Bad \usage lines found in documentation object 'runoptprob':
  runoptprob <- function(pfilename, probclass=NULL, minmeth=NULL, submeth=NULL, 
                   istart="1", runopts=list(), control=list(), ...) 

Functions with \usage entries need to have the appropriate \alias
entries, and all their arguments documented.
The \usage entries must correspond to syntactically valid R code.
See chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in 'vignettes' ... WARNING
Files in the 'vignettes' directory but no files in 'inst/doc':
  'nlsOptTests.Rmd', 'nlsOptTests.bib'
Package has no Sweave vignette sources and no VignetteBuilder field.
* checking examples ... NONE
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
  Running 'tDanielWood-nls.R'
Warning message:
running command '"R:/lib/R/R-PATC~1/bin/x64/R" CMD BATCH --vanilla  "tDanielWood-nls.R" "tDanielWood-nls.Rout"' had status 1 
 ERROR
Running the tests in 'tests/tDanielWood-nls.R' failed.
Last 13 lines of output:
  Loading required package: nlmrt
  Loading required package: optimrx
  > pfname <- "DanielWood"
  > # try it
  > counters <- new.env()
  > test1 <- runoptprob(pfilename=pfname, minmeth="nls")
  list()
  list()
  Error in file(filename, "r", encoding = encoding) : 
    cannot open the connection
  Calls: runoptprob -> source -> file
  In addition: Warning message:
  In file(filename, "r", encoding = encoding) :
    cannot open file '/home/john/rsvnall/optimizer/pkg/NISTO/inst/extdata/DanielWood.prb': No such file or directory
  Execution halted
* checking PDF version of manual ... OK
* DONE

Status: 1 ERROR, 2 WARNINGs, 1 NOTE
See
  'R:/run/building/build_2017-11-23-15-24/RF_PKG_CHECK/PKGS/NISTO.Rcheck/00check.log'
for details.

Run time: 34.88 seconds.