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nltestprob log file (check_x86_64_linux)
Wed Nov 22 19:10:16 2017: Checking package nltestprob (SVN revision 1649) ...
* using log directory ‘/mnt/building/build_2017-11-22-19-09/RF_PKG_CHECK/PKGS/nltestprob.Rcheck’
* using R version 3.4.3 beta (2017-11-20 r73757)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--as-cran’
* checking for file ‘nltestprob/DESCRIPTION’ ... OK
* this is package ‘nltestprob’ version ‘2016-10-26’
* checking CRAN incoming feasibility ... NOTE
Maintainer: ‘John C. Nash ’
New submission
Version contains large components (2016-10-26)
Unknown, possibly mis-spelled, fields in DESCRIPTION:
‘LicenseDetails’
The Date field is over a month old.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... ERROR
Found the following files with duplicate lower-cased file names:
inst/probfiles/2fix/brown.R
File names must not differ just by case to be usable on all R
platforms.
Please rename the files and try again.
See section ‘Package structure’ in the ‘Writing R Extensions’ manual.
OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘nltestprob’ can be installed ... [1s/1s] OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [4s/4s] NOTE
runoptprob: no visible binding for global variable ‘solveboundopt’
Undefined global functions or variables:
solveboundopt
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in ‘vignettes’ ... WARNING
Files in the 'vignettes' directory but no files in 'inst/doc':
‘nlsOptTests.Rmd’, ‘nlsOptTests.bib’, ‘nlsOptTests.html’
Package has no Sweave vignette sources and no VignetteBuilder field.
* checking examples ... NONE
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘tDanielWood-nls.R’
[1s/1s] ERROR
Running the tests in ‘tests/tDanielWood-nls.R’ failed.
Last 13 lines of output:
Loading required package: optimr
> pfname <- "DanielWood"
> # try it
> counters <- new.env()
> test1 <- runoptprob(pfilename=pfname, minmeth="nls")
list()
list()
pfilepath: /home/john/rsvnall/optimizer/pkg/nltestprob/inst/probfiles/DanielWood.prb
Error in file(filename, "r", encoding = encoding) :
cannot open the connection
Calls: runoptprob -> source -> file
In addition: Warning message:
In file(filename, "r", encoding = encoding) :
cannot open file '/home/john/rsvnall/optimizer/pkg/nltestprob/inst/probfiles/DanielWood.prb': No such file or directory
Execution halted
* checking PDF version of manual ... OK
* DONE
Status: 2 ERRORs, 1 WARNING, 2 NOTEs
See
‘/mnt/building/build_2017-11-22-19-09/RF_PKG_CHECK/PKGS/nltestprob.Rcheck/00check.log’
for details.
Run time: 26.76 seconds.