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Rcgdescent log file (build_win64)

Wed Dec 19 21:56:10 2018: Building binary for package Rcgdescent (SVN revision 1810)
using R version 3.5.2 RC (2018-12-17 r75863) ...

* installing to library 'R:/lib/local/3.5'
* installing *source* package 'Rcgdescent' ...
** libs

*** arch - i386
c:/Rtools/mingw_32/bin/g++  -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"     -O2 -Wall  -mtune=generic -c Rcgdescent_init.cc -o Rcgdescent_init.o
c:/Rtools/mingw_32/bin/g++  -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"     -O2 -Wall  -mtune=generic -c cg_descent.cc -o cg_descent.o
cg_descent.cc: In function 'int cg_descent(double*, long int, cg_stats*, cg_parameter*, double, std::function, std::function, std::function, double*)':
cg_descent.cc:118:43: warning: variable 'n5' set but not used [-Wunused-but-set-variable]
     long     i, iter, IterRestart, maxit, n5, nrestart, nrestartsub ;
                                           ^
cg_descent.cc:119:49: warning: variable 'PrintLevel' set but not used [-Wunused-but-set-variable]
     int     nslow, slowlimit, IterQuad, status, PrintLevel, QuadF, StopRule ;
                                                 ^
cg_descent.cc:119:68: warning: variable 'StopRule' set but not used [-Wunused-but-set-variable]
     int     nslow, slowlimit, IterQuad, status, PrintLevel, QuadF, StopRule ;
                                                                    ^
cg_descent.cc:130:13: warning: variable 'IterSubStart' set but not used [-Wunused-but-set-variable]
             IterSubStart, IterSubRestart, FirstFull, SubSkip, SubCheck,
             ^
cg_descent.cc:131:47: warning: variable 'NegDiag' set but not used [-Wunused-but-set-variable]
             StartSkip, StartCheck, DenseCol1, NegDiag, memk_is_mem,
                                               ^
cg_descent.cc: In function 'int cg_line(cg_com*)':
cg_descent.cc:1716:17: warning: variable 's1' set but not used [-Wunused-but-set-variable]
     const char *s1; // , *s2, *fmt1, *fmt2 ;
                 ^
cg_descent.cc: In function 'int cg_contract(double*, double*, double*, double*, double*, double*, cg_com*)':
cg_descent.cc:2085:23: warning: variable 'PrintLevel' set but not used [-Wunused-but-set-variable]
     int AWolfe, iter, PrintLevel, toggle, status ;
                       ^
cg_descent.cc:2086:42: warning: variable 'd1' set but not used [-Wunused-but-set-variable]
     double a, alpha, b, old, da, db, df, d1, dold, f, fa, fb, f1, fold,
                                          ^
cg_descent.cc: In function 'int cg_descent(double*, long int, cg_stats*, cg_parameter*, double, std::function, std::function, std::function, double*)':
cg_descent.cc:1616:40: warning: 'work' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if ( Work == nullptr ) free (work) ;
                                        ^
cg_descent.cc:1492:31: warning: 'NumSub' may be used uninitialized in this function [-Wmaybe-uninitialized]
         Stat->NumSub = NumSub ;
                               ^
cg_descent.cc:1493:33: warning: 'IterSub' may be used uninitialized in this function [-Wmaybe-uninitialized]
         Stat->IterSub = IterSub ;
                                 ^
cg_descent.cc:936:44: warning: 'stgkeep' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         wsub [0] = stgkeep ;
                                            ^
cg_descent.cc:1442:33: warning: 'gsubnorm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 t1 = MAX(gnorm2 -gsubnorm2, ZERO) ;
                                 ^
cg_descent.cc:934:33: warning: 'd0isg' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     if ( !d0isg && !memk_is_mem )
                                 ^
cg_descent.cc:131:36: warning: 'DenseCol1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             StartSkip, StartCheck, DenseCol1, NegDiag, memk_is_mem,
                                    ^
cg_descent.cc:513:27: warning: 'StartSkip' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 if ( iter - StartSkip > SubSkip )
                           ^
cg_descent.cc:534:34: warning: 'IterSubRestart' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 IterSubRestart++ ;
                                  ^
cg_descent.cc:1089:37: warning: 'SkFlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 cg_copy0 (wsub+(mp+1), vsub, j) ;
                                     ^
cg_descent.cc:547:47: warning: 'SkFstart' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 cg_copy0 (gsubtemp, wsub+mp, j) ;
                                               ^
cg_descent.cc:1312:39: warning: 'mp_begin' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 mlast_sub = (mp_begin + IterSubRestart) % mem ;
                                       ^
cg_descent.cc:1331:40: warning: 'memk_begin' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 memk = MIN (memk_begin + IterSubRestart, mem) ;
                                        ^
cg_descent.cc:696:34: warning: 'beta' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         t2 = beta*alpha/alphaold ;
                                  ^
cg_descent.cc:572:20: warning: 'nrestartsub' may be used uninitialized in this function [-Wmaybe-uninitialized]
                    if ( IterSubRestart == nrestartsub ) Restart = true ;
                    ^
cg_descent.cc:940:62: warning: 'wsub' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         cg_trisolve (wsub, Rk, mem, memk, 0) ;
                                                              ^
cg_descent.cc:1088:45: warning: 'vsub' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 cg_copy0 (wsub, vsub+j, mp+1) ;
                                             ^
cg_descent.cc:1397:57: warning: 'tau' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     cg_daxpy0 (gsubtemp, Sk+mpp, tau [mp] - t, nsub) ;
                                                         ^
cg_descent.cc:938:71: warning: 'gkeep' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         cg_matvec (wsub+1, SkF+n, gkeep, mlast, n, 0) ;
                                                                       ^
cg_descent.cc:1395:56: warning: 'gsubtemp' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     t = cg_dot0 (Yk+mpp, gsubtemp, nsub)/SkYk [mp] ;
                                                        ^
cg_descent.cc:136:20: warning: 'gsub' may be used uninitialized in this function [-Wmaybe-uninitialized]
            *dsub, *gsub, *gsubtemp, *gkeep, *tau, *vsub, *wsub ;
                    ^
cg_descent.cc:567:80: warning: 'dsub' may be used uninitialized in this function [-Wmaybe-uninitialized]
                    if ( IterSubRestart > 1 ) dnorm2 = cg_dot0 (dsub, dsub,nsub);
                                                                                ^
cg_descent.cc:1395:66: warning: 'SkYk' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     t = cg_dot0 (Yk+mpp, gsubtemp, nsub)/SkYk [mp] ;
                                                                  ^
cg_descent.cc:942:44: warning: 'Yk' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         Yk [1] -= wsub [1] ;
                                            ^
cg_descent.cc:685:65: warning: 'stemp' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         cg_matvec (wsub, SkF, stemp, mem, n, 0) ;
                                                                 ^
cg_descent.cc:938:69: warning: 'SkF' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         cg_matvec (wsub+1, SkF+n, gkeep, mlast, n, 0) ;
                                                                     ^
cg_descent.cc:1005:51: warning: 'Sk' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 cg_step (Sk+spp, xtemp, x, -ONE, n) ;
                                                   ^
cg_descent.cc:736:70: warning: 'Re' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     wsub [mem] = (alpha*dphi - cg_dot0 (wsub, Re, mem))/zeta;
                                                                      ^
cg_descent.cc:764:37: warning: 'Rk' may be used uninitialized in this function [-Wmaybe-uninitialized]
                             Rk [spp1] = t1*t3 + t2*t4 ;
                                     ^
cg_descent.cc:499:17: warning: 'SubCheck' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 if ( (iter - StartCheck > SubCheck) && !Subspace )
                 ^
cg_descent.cc:721:30: warning: 'memsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     Yk [memsq] = t ;  /* also store it in Yk */
                              ^
c:/Rtools/mingw_32/bin/g++  -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"     -O2 -Wall  -mtune=generic -c cg_wrapper.cc -o cg_wrapper.o
c:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o Rcgdescent.dll tmp.def Rcgdescent_init.o cg_descent.o cg_wrapper.o -LR:/base/local215/lib/i386 -LR:/base/local215/lib -LR:/lib/R/R-patched/bin/i386 -lR
installing to R:/lib/local/3.5/Rcgdescent/libs/i386

*** arch - x64
c:/Rtools/mingw_64/bin/g++  -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"     -O2 -Wall  -mtune=generic -c Rcgdescent_init.cc -o Rcgdescent_init.o
c:/Rtools/mingw_64/bin/g++  -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"     -O2 -Wall  -mtune=generic -c cg_descent.cc -o cg_descent.o
cg_descent.cc: In function 'int cg_descent(double*, long int, cg_stats*, cg_parameter*, double, std::function, std::function, std::function, double*)':
cg_descent.cc:118:43: warning: variable 'n5' set but not used [-Wunused-but-set-variable]
     long     i, iter, IterRestart, maxit, n5, nrestart, nrestartsub ;
                                           ^
cg_descent.cc:119:49: warning: variable 'PrintLevel' set but not used [-Wunused-but-set-variable]
     int     nslow, slowlimit, IterQuad, status, PrintLevel, QuadF, StopRule ;
                                                 ^
cg_descent.cc:119:68: warning: variable 'StopRule' set but not used [-Wunused-but-set-variable]
     int     nslow, slowlimit, IterQuad, status, PrintLevel, QuadF, StopRule ;
                                                                    ^
cg_descent.cc:130:13: warning: variable 'IterSubStart' set but not used [-Wunused-but-set-variable]
             IterSubStart, IterSubRestart, FirstFull, SubSkip, SubCheck,
             ^
cg_descent.cc:131:47: warning: variable 'NegDiag' set but not used [-Wunused-but-set-variable]
             StartSkip, StartCheck, DenseCol1, NegDiag, memk_is_mem,
                                               ^
cg_descent.cc: In function 'int cg_line(cg_com*)':
cg_descent.cc:1716:17: warning: variable 's1' set but not used [-Wunused-but-set-variable]
     const char *s1; // , *s2, *fmt1, *fmt2 ;
                 ^
cg_descent.cc: In function 'int cg_contract(double*, double*, double*, double*, double*, double*, cg_com*)':
cg_descent.cc:2085:23: warning: variable 'PrintLevel' set but not used [-Wunused-but-set-variable]
     int AWolfe, iter, PrintLevel, toggle, status ;
                       ^
cg_descent.cc:2086:42: warning: variable 'd1' set but not used [-Wunused-but-set-variable]
     double a, alpha, b, old, da, db, df, d1, dold, f, fa, fb, f1, fold,
                                          ^
cg_descent.cc: In function 'int cg_descent(double*, long int, cg_stats*, cg_parameter*, double, std::function, std::function, std::function, double*)':
cg_descent.cc:1616:40: warning: 'work' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if ( Work == nullptr ) free (work) ;
                                        ^
cg_descent.cc:1492:31: warning: 'NumSub' may be used uninitialized in this function [-Wmaybe-uninitialized]
         Stat->NumSub = NumSub ;
                               ^
cg_descent.cc:1493:33: warning: 'IterSub' may be used uninitialized in this function [-Wmaybe-uninitialized]
         Stat->IterSub = IterSub ;
                                 ^
cg_descent.cc:936:44: warning: 'stgkeep' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         wsub [0] = stgkeep ;
                                            ^
cg_descent.cc:1442:33: warning: 'gsubnorm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 t1 = MAX(gnorm2 -gsubnorm2, ZERO) ;
                                 ^
cg_descent.cc:934:33: warning: 'd0isg' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     if ( !d0isg && !memk_is_mem )
                                 ^
cg_descent.cc:131:36: warning: 'DenseCol1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             StartSkip, StartCheck, DenseCol1, NegDiag, memk_is_mem,
                                    ^
cg_descent.cc:513:27: warning: 'StartSkip' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 if ( iter - StartSkip > SubSkip )
                           ^
cg_descent.cc:534:34: warning: 'IterSubRestart' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 IterSubRestart++ ;
                                  ^
cg_descent.cc:1089:37: warning: 'SkFlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 cg_copy0 (wsub+(mp+1), vsub, j) ;
                                     ^
cg_descent.cc:128:49: warning: 'SkFstart' may be used uninitialized in this function [-Wmaybe-uninitialized]
             mp, mp_begin, mpp, nsub, spp, spp1, SkFstart, SkFlast, Subspace,
                                                 ^
cg_descent.cc:1312:39: warning: 'mp_begin' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 mlast_sub = (mp_begin + IterSubRestart) % mem ;
                                       ^
cg_descent.cc:1331:40: warning: 'memk_begin' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 memk = MIN (memk_begin + IterSubRestart, mem) ;
                                        ^
cg_descent.cc:696:34: warning: 'beta' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         t2 = beta*alpha/alphaold ;
                                  ^
cg_descent.cc:572:20: warning: 'nrestartsub' may be used uninitialized in this function [-Wmaybe-uninitialized]
                    if ( IterSubRestart == nrestartsub ) Restart = true ;
                    ^
cg_descent.cc:940:62: warning: 'wsub' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         cg_trisolve (wsub, Rk, mem, memk, 0) ;
                                                              ^
cg_descent.cc:1088:45: warning: 'vsub' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 cg_copy0 (wsub, vsub+j, mp+1) ;
                                             ^
cg_descent.cc:1397:57: warning: 'tau' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     cg_daxpy0 (gsubtemp, Sk+mpp, tau [mp] - t, nsub) ;
                                                         ^
cg_descent.cc:938:71: warning: 'gkeep' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         cg_matvec (wsub+1, SkF+n, gkeep, mlast, n, 0) ;
                                                                       ^
cg_descent.cc:1395:56: warning: 'gsubtemp' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     t = cg_dot0 (Yk+mpp, gsubtemp, nsub)/SkYk [mp] ;
                                                        ^
cg_descent.cc:136:20: warning: 'gsub' may be used uninitialized in this function [-Wmaybe-uninitialized]
            *dsub, *gsub, *gsubtemp, *gkeep, *tau, *vsub, *wsub ;
                    ^
cg_descent.cc:567:80: warning: 'dsub' may be used uninitialized in this function [-Wmaybe-uninitialized]
                    if ( IterSubRestart > 1 ) dnorm2 = cg_dot0 (dsub, dsub,nsub);
                                                                                ^
cg_descent.cc:1395:66: warning: 'SkYk' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     t = cg_dot0 (Yk+mpp, gsubtemp, nsub)/SkYk [mp] ;
                                                                  ^
cg_descent.cc:942:44: warning: 'Yk' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         Yk [1] -= wsub [1] ;
                                            ^
cg_descent.cc:685:65: warning: 'stemp' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         cg_matvec (wsub, SkF, stemp, mem, n, 0) ;
                                                                 ^
cg_descent.cc:938:69: warning: 'SkF' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         cg_matvec (wsub+1, SkF+n, gkeep, mlast, n, 0) ;
                                                                     ^
cg_descent.cc:1005:51: warning: 'Sk' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 cg_step (Sk+spp, xtemp, x, -ONE, n) ;
                                                   ^
cg_descent.cc:736:70: warning: 'Re' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     wsub [mem] = (alpha*dphi - cg_dot0 (wsub, Re, mem))/zeta;
                                                                      ^
cg_descent.cc:764:37: warning: 'Rk' may be used uninitialized in this function [-Wmaybe-uninitialized]
                             Rk [spp1] = t1*t3 + t2*t4 ;
                                     ^
cg_descent.cc:499:17: warning: 'SubCheck' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 if ( (iter - StartCheck > SubCheck) && !Subspace )
                 ^
cg_descent.cc:127:32: warning: 'memsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
     int     l1, l2, j, k, mem, memsq, memk, memk_begin, mlast, mlast_sub,
                                ^
c:/Rtools/mingw_64/bin/g++  -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"     -O2 -Wall  -mtune=generic -c cg_wrapper.cc -o cg_wrapper.o
c:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o Rcgdescent.dll tmp.def Rcgdescent_init.o cg_descent.o cg_wrapper.o -LR:/base/local215/lib/x64 -LR:/base/local215/lib -LR:/lib/R/R-patched/bin/x64 -lR
installing to R:/lib/local/3.5/Rcgdescent/libs/x64
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'Rcgdescent'
    finding HTML links ... done
    ControlParams                           html  
    Rcgdescent                              html  
** building package indices
** testing if installed package can be loaded
*** arch - i386
*** arch - x64
* MD5 sums
packaged installation of 'Rcgdescent' as Rcgdescent_2018-12.19.zip
* DONE (Rcgdescent)
In R CMD INSTALL
Run time: 11.18 seconds.
Thanks to:
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