R Development Page

hyperSpec log file (check_x86_64_linux)

Thu Aug  6 12:26:43 2015: Checking package hyperSpec (SVN revision 1200) ...
* using log directory ‘/mnt/building/build_2015-08-06-12-24/RF_PKG_CHECK/PKGS/hyperSpec.Rcheck’
* using R version 3.2.2 beta (2015-08-05 r68859)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--as-cran’
* checking for file ‘hyperSpec/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘hyperSpec’ version ‘0.98-20150805’
* checking CRAN incoming feasibility ... Note_to_CRAN_maintainers
Maintainer: ‘Claudia Beleites ’
* checking package namespace information ... OK
* checking package dependencies ... NOTE
  No repository set, so cyclic dependency check skipped
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘hyperSpec’ can be installed ... [5s/5s] OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
Warning: local assignments to syntactic functions: ~
Warning: local assignments to syntactic functions: ~
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking R/sysdata.rda ... OK
* checking line endings in Makefiles ... OK
* checking for GNU extensions in Makefiles ... OK
* checking sizes of PDF files under ‘inst/doc’ ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... NOTE
The following files look like leftovers/mistakes:
  ‘Rplots.pdf’
Please remove them from your package.
* checking examples ... [19s/19s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘unittests.R’
 [2s/2s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ...
   ‘baseline.Rnw’ ... [4s/4s] OK
   ‘chondro.Rnw’ ... [0s/0s] OK
   ‘fileio.Rnw’ ... [0s/0s] OK
   ‘flu.Rnw’ ... [2s/2s] OK
   ‘introduction.Rnw’ ... [13s/13s] OK
   ‘laser.Rnw’ using ‘UTF-8’ ... [3s/3s] OK
   ‘plotting.Rnw’ using ‘UTF-8’ ... [14s/14s] OK
 [37s/37s] OK
* checking re-building of vignette outputs ... [81s/86s] OK
* checking PDF version of manual ... OK
* DONE

Status: 3 NOTEs
See
  ‘/mnt/building/build_2015-08-06-12-24/RF_PKG_CHECK/PKGS/hyperSpec.Rcheck/00check.log’
for details.


Run time: 247.54 seconds.