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NiLeDAM log file (check_x86_64_linux)

Thu Aug 18 15:14:33 2016: Checking package NiLeDAM (SVN revision 8) ...
* using log directory ‘/mnt/building/build_2016-08-18-12-24/RF_PKG_CHECK/PKGS/NiLeDAM.Rcheck’
* using R version 3.3.1 Patched (2016-08-17 r71112)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--as-cran’
* checking for file ‘NiLeDAM/DESCRIPTION’ ... OK
* this is package ‘NiLeDAM’ version ‘0.1’
* checking CRAN incoming feasibility ... NOTE
Maintainer: ‘Nathalie Villa-Vialaneix ’

New submission

The Title field should be in title case, current version then in title case:
‘Monazite Datation for the NiLeDAM team’
‘Monazite Datation for the NiLeDAM Team’

The Date field is over a month old.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘NiLeDAM’ can be installed ... [1s/1s] OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... NOTE
Warning: no function found corresponding to methods exports from ‘NiLeDAM’ for: ‘show’

A namespace must be able to be loaded with just the base namespace
loaded: otherwise if the namespace gets loaded by a saved object, the
session will be unable to start.

Probably some imports need to be declared in the NAMESPACE file.
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
  ‘methods’ ‘nleqslv’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
calculateAges: no visible binding for global variable ‘quantile’
calculateAges: no visible binding for global variable ‘sd’
calculateAges: no visible global function definition for ‘new’
calculateOneAge: no visible global function definition for ‘nleqslv’
calculateOneDistribution: no visible global function definition for
  ‘rnorm’
testAges: no visible global function definition for ‘new’
testOnePop: no visible global function definition for ‘qnorm’
testPop: no visible global function definition for ‘qchisq’
testPop: no visible global function definition for ‘optim’
testPop: no visible global function definition for ‘new’
plot,oneAgeTest : : no visible global function definition
  for ‘dnorm’
plot,oneAgeTest : : no visible global function definition
  for ‘lines’
plot,oneAgeTest : : no visible global function definition
  for ‘text’
plot,oneAgeTest : : no visible global function definition
  for ‘qnorm’
Undefined global functions or variables:
  dnorm lines new nleqslv optim qchisq qnorm quantile rnorm sd text
Consider adding
  importFrom("graphics", "lines", "text")
  importFrom("methods", "new")
  importFrom("stats", "dnorm", "optim", "qchisq", "qnorm", "quantile",
             "rnorm", "sd")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [1s/1s] OK
* checking PDF version of manual ... OK
* DONE

Status: 5 NOTEs
See
  ‘/mnt/building/build_2016-08-18-12-24/RF_PKG_CHECK/PKGS/NiLeDAM.Rcheck/00check.log’
for details.


Run time: 31.16 seconds.

Additional Logs:   00install.out
Thanks to:
Vienna University of Economics and Business University of Wisconsin - Madison Powered By FusionForge